Gene Ssol_2002 details

Gene Information

• Locus tag: Ssol_2002
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1797643
• End bp: 1798440
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 36%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: ACX92212
• Protein GI: 261602609

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGTAA TTTCTCTGAA GTTTAATACC CTACAAGCCA TATCCTTTTT TCTATCTCTC 
CTTTTAGCTT TACCAACTCT CTATTTGCTA TTTTACGGCT ATGGTCCGTT TTTTGTTAAA 
TCAGTCGCGT TCAGTAGCTC TTTACTTTCC TCAATAGGTT TATCGTTTTT TGCTTCAGCC 
CTTTCCATTG TAATAACTGT TCTTATCTTT ACTCCCTTGG CATATTATTT ATCAAGACAT 
AGGAATCCAA TTATTGAGAC TTTAGTCGAT GTGCCAGCAT CTATACCGCA TCCCCTAGTT 
GGCATTGCTT TAATTTTCAT TGATAGTCCC ACTAATCCTC TAGGTGCTTT ACTTTACTCT 
CATGGTATTA TTTTTTACTA CACTTATACT GGCTTATTGT TGGCTTTGAT TATTGTTTCT 
AGTCCTATCT ATATTCGTTC GATGCAGAAT TTCTTCGAGT CTCTTCCAAG GTCTTATGAA 
ATATATGCCA TGAGTTTAGG TGCTTCCGAG TTCAAAGTAT TTACTTCCGT AGTTTTCCCT 
CTTTCAATTA GGGGGATAAT ATCTGCTGGG CTAACTTCTA TTGCTAGAGC TATAAGTGAA 
TTTGGATCTG TGGTAATAGT TGCACCTTAT GTTACTGGCT GGTTGTTTAA CAACGCGTAT 
GTGGCTTCAG TATATATTTA TAATGAATAC GAAACGTATT TTAGCGCTTC AATAAGTGCC 
TCAGCTACGC TTCTCCTTTT CTCCCTCATA CTAATAGTTA CAAGTAGGAT AGTTAACCAT 
TTCTTGTATA AGACATGA 

 

Protein sequence

MRVISLKFNT LQAISFFLSL LLALPTLYLL FYGYGPFFVK SVAFSSSLLS SIGLSFFASA 
LSIVITVLIF TPLAYYLSRH RNPIIETLVD VPASIPHPLV GIALIFIDSP TNPLGALLYS 
HGIIFYYTYT GLLLALIIVS SPIYIRSMQN FFESLPRSYE IYAMSLGASE FKVFTSVVFP 
LSIRGIISAG LTSIARAISE FGSVVIVAPY VTGWLFNNAY VASVYIYNEY ETYFSASISA 
SATLLLFSLI LIVTSRIVNH FLYKT