Gene Ssol_1983 details

Gene Information

• Locus tag: Ssol_1983
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1770373
• End bp: 1770978
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 30%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: ACX92194
• Protein GI: 261602591

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATC TTTATAAAAT TAACTTTTCA ATATCACACC AAGGTTGCTG GACCAGCAAA 
ATAAAAGATA GTGTTGTTAC CTTAAATGTA TCAAAATATA ATAATAAGAA AGTCAGAGTC 
ACAATAGCTT CTCCAAAATT AATAGTAACT GACCTAAAAA GGTCAGAAAA CGTTTACGAA 
ATTCTAAAGT ATAGAAAGGT AAAAGGGGGT TATATAATTG ACTTCCTTGA AGATCTGAGT 
ACTACAATTT CAGGATATAT ACTCTCGAGC AGTAATATAT TAGAATATAG AAATGTCGTA 
AGGGAAGGAA TAGAAAAGTG GGAAGTAACA ACTTTAGCCA AATCTTTAGT AGGCAAATTA 
TCAGAAAGAT TTCCCATAGA TAGCATTGTA GTTAAAGAAA TAAAGTTTTC AGATATGTTC 
TATAATGGTT TGACAGAAAA GGAGATACTA GTCCTAAAAA CCGCAATAAC TATGGGATAT 
TTCAATTATC CAAGGCAAAT AAAAGCTAAG GAAATTGCTG AAAAATTAGG TATCTCCAAG 
CAAGATTTCC TTTATCATCT GCGAAAATCA ATAGAGAAAA TAATTTTCTC ATCAGTTATA 
GAATAG 

 

Protein sequence

MKNLYKINFS ISHQGCWTSK IKDSVVTLNV SKYNNKKVRV TIASPKLIVT DLKRSENVYE 
ILKYRKVKGG YIIDFLEDLS TTISGYILSS SNILEYRNVV REGIEKWEVT TLAKSLVGKL 
SERFPIDSIV VKEIKFSDMF YNGLTEKEIL VLKTAITMGY FNYPRQIKAK EIAEKLGISK 
QDFLYHLRKS IEKIIFSSVI E