Gene Ssol_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1978 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1765025 
End bp1765828 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content36% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionACX92189 
Protein GI261602586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGT GGGTATATTT AGGTGCAATA GTAGTAGGAA TTTACTTTCT ATTTCCACTT 
TACATTTTAG TATTACTAGC ATTTAATTCC CCAAAATATA CCGTCTTAGC GAAATTCCCC
TCACTATTAC CGGTGTCACT AACACTAAAT AATCTACTAA CAGCATTACA AGGCACGGCA
TTTATTGATC CATTCATAAA AAGTCTGGAG ACAGCAACAT TAGTGGGGAT CATTACCATA
GCATTGGCTA TTCCAGCGGG ATATGGTTTA AGTAGATTAC CAAGAGCCAT AGCATATTCC
ATAATTATCC TTCTATTAGT TACTAATATG ATGCCAGCAA TAGTAATAGG TATTCCAATA
GCAGTAGATT TTCTTAAACT TCATCTTTTT GAATCCGTAG TAGGTCTAGC CTTAGCCCAA
ACACTAATAA CACTACCATT AGCTACGTTC ATCTTACAAG GCACGTTCTC GTCAATACCC
ATTGACCTCG AACATCAAGC TAGAGTTGAT GGTGCAAATT TATTTAATAG GTTATTTTCA
GTACTCTTAC CACTAGCAGC ACCTGGTATA GCAGCAGCAT TCCTAATATC ATGGATGTTC
TCATGGGATG AGTTTACTTA TGCAATCCTA TTAATTCCCT ATCACTCCAC ACTTCCAGTA
ACAATATACC AAGACGTTAC CAGAGGAAAC TTATTGGCAG GAATAGCATT TTCACTAATA
TTCACACTTC CCGTAATAAT TTTAACTTTT GCATTACAAA AATATCTAAG AGGAGAATAT
CTAGCAGGGG GGATAAAAGG ATGA
 
Protein sequence
MRLWVYLGAI VVGIYFLFPL YILVLLAFNS PKYTVLAKFP SLLPVSLTLN NLLTALQGTA 
FIDPFIKSLE TATLVGIITI ALAIPAGYGL SRLPRAIAYS IIILLLVTNM MPAIVIGIPI
AVDFLKLHLF ESVVGLALAQ TLITLPLATF ILQGTFSSIP IDLEHQARVD GANLFNRLFS
VLLPLAAPGI AAAFLISWMF SWDEFTYAIL LIPYHSTLPV TIYQDVTRGN LLAGIAFSLI
FTLPVIILTF ALQKYLRGEY LAGGIKG