Gene Ssol_1941 details

Gene Information

• Locus tag: Ssol_1941
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1723162
• End bp: 1726662
• Gene Length: 3501 bp
• Protein Length: 1166 aa
• Translation table: 11
• GC content: 33%
• Product: reverse gyrase
• Protein accession: ACX92152
• Protein GI: 261602549

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATG TAATGTATAA AAATTCCTGC CCTAACTGTG GTGGGGACAT TTCTGGTGAC 
AGATTGCTGA ATGGTCTGCC ATGTGAGGCT TGTTTACCTT ATATTAACGG AATAGATGAT 
GTAGACCATA TTTCAAAGGT AAAAACGTTA TACAATATTT TACTTAATAA CGATAAAATT 
AAAAATTATT GGAATTTATA TTATAACATC ACTACATTTG AAACTGTCTT TAAATATTTT 
AGAGATAAAA CTGGATATGA ACCTTGGTCT CTCCAGAAAC TATGGTTAAG AAGGCTTGCG 
AGTAATCAGA GTTTCACTAT GTCAGCTCCA ACTGGATTGG GGAAGACAAC CACATTGATG 
ACCTATTCTG TCTTTATTGG CCAAGATGTA GTATATATCG TTCCCACAAA GTCCTTAATG 
GAACAAGTAT GTAAAAGATT AGAGAAATTA GGTGCTCAAG TATCTTGTGG TAAAATTGAT 
CAAAAGAAAG TAAGCGTAAT AACAATAAGT TACCTAAATA AGAACGCGGA CTCGATAGTA 
AGCCTTAAGC CAAACTTTGT CGTAATAGAT GATGCAGATG CCGTAATAAA GAGCGGTAAA 
ACAACTGATA GACTTGTTAG CTTATTGGGG ATTCCGAAGG ACGTTTATGA GAGTGCGATT 
CAACTAATTA GGCTAAGGAA TAAATACTAT TTCTCTAACG AATACACGGA AGAAGTTAAA 
GAAAAAATTA GAGAATTGGA GCTTAAGATA GCAGAATTTA AGGATAAAAT TTCACAGCTA 
GTTATAGCTA GTGCTACAAT ACGACCTAAA GGCATTAAGC AAAAAGCTTT AAGGTTATTA 
ACAGGTTTTG AACCTTCTTC TATTCAGTTA TATGCTAGGA ATATAATTGA TGCTTATACT 
GAAAATCTAG ATCTTTCAAT AGTCAAGGAA TTAGGAAGTG GTGGGTTAAT TCTAGTTTCG 
AAAGAATATG GTAGGTCCAA ATTAAATGAA ATAAAGAAAT ACGTTGAGGA CTTAGGTTTT 
AACGCTAAAT TAGCAATAAG TGGAAGGAAA TTCCTCGACG ATTTCTCTCA AGGTAAAGTA 
GATATTCTAG TAGGTTCTGC GTCTTATTAT GGTGTTGCCG TTAGAGGAAT TGATGAACCT 
AAAAGATTAA AATACGTCAT ATATTATGGA GTACCTAAAA TAAGAGCTAA GCTTTTTGAC 
GCTTTATCTA ATCCATTTAC ATTACTCAGA GTAGGTAAAT TAATTGGAAT CGATTTTTCA 
AAGTTACAGA ATAAGATTTT AATTCTGAAT CCTTCTGAAG TTCAATTATT GAAGTTTTCC 
ATAATAAAAG GAGAAAGTAT AAACTACCAT AAGTTAGAAC AATTGAGGCA AGAATTGCTA 
TATTATATGT CATTAGTTAA AGATAAGTTG AAGGAGAAAG TCGAGGATAC TTTAATTTCA 
GATAGTTTTG TAATTACCAA GCAAAATGGA AATTATTATA TCGTCTATCC CGATATGATA 
ACATATTTGC AAGGCTCTGG GAGGGCAAGC AGACTTTACA ATGGTGGATT GACTCTTGGA 
TTTTCAATAA TTCTAGTAGA TGATAGACAC ATCTTTGAAA TATTGGAGAA GAAAATGCAA 
AAATTGTTTC CTAACACTAC CTTTACTTCA TTATCTAATA CAAATTTATC TGAAATAAAA 
ATTAAACTGG AAGACTCTAG AAAAGAAGAA GGGAATAGGG TCCATTTTAA CATATCAACT 
GGTTTACTTA TAGTAGAGTC TCCAACAAAA GCAAAGACTA TAGCTAAAAT GTTTAGCAGA 
CCCTCGGTTA GGATAAGAAA TAAAGTACCA GTATACGAAA CCATTATAGT AGATGGTAAT 
CAAATATACG TGTTAGATAT AGTAGCTTCA AAAGGCCATA TCGTGGATCT AACCTTAGAA 
GATATAGGAT ATTATGGGAT AAAAGTAGAA GATGATGGAA CTATAAAGCC ATATTACGAC 
TTAATAAAGA AATGCCTCGA CTGTAATAAG ATATTTTCTA GTGCTTCAGA TAAATGTCCA 
TACTGTGGTT CTGCAAATCT TCAATCAGCT CAAACTACCA TTAACTTACT CAGGGAGTTA 
GCGTTATCAG TAGATAAAGT GTTTATAGCT TCTGACCCAG ATACTGAAGG GGAGAAGATA 
GCATATGATC TGGCTTCATT CTTGTCTCCA TATAATTCCA ACGTGTATAG AGTAGTATAT 
CACGAAATTA CTAAGAAGGC AATATTAGAG GCATTGAGGA ATCCCAAAAA GATTAATACA 
AATCTAGTAA TGAGTCAGAT AGTTAGAAGG ATAGAAGATA GATGGATTGG CTTCACGTTA 
AGTAACTTAC TAAAAACGAA GTTTAATGGA CATAATCATG GTGCGGGTAG GGTACAAACT 
CCAGTTTTAG GTTGGATAGT GAATAAAACG ATAAAGTATA AGAGTGCAAT GGGTCACGTG 
GTTTATATTG ACATCGCGGG ATACTCCATT AAAAAATATT TTAGTGAAAA AAGGAAGGTG 
GAAGAGTATA TAAATAACTT ACAAGTAGCT AGAATTGAAA AAATCTCTGA AGAGAAAATA 
CTATTATCTC CATTACCTCC CTTTACTACA GACACCTTAC TTATTGAGGC TAACATGAAA 
TATAAACTAC CAGCTAATCT TGTAATGAAG ATTGCTCAAG ATCTATTTGA GGCTGGCCTA 
ATAACATATC ATAGAACTGA TAGTACTCAT ATTTCCTCTG TAGGTATAGA AATAGCAAAG 
GAGTATCTTC AAAAGCAAGC GCTCATTAAA GAGTTTGTTC CTAGATCATG GGAATCATCG 
GAGGAAGGTG CTCATGAGGC AATAAGACCA ACTAGAGCTA TAGACGTTAA CGAGTTAATT 
CAAGAAATAG AGGAGAATCC TTATAAGTAT TCGATAAGGT TTAGTAAATT ACACTTATTA 
ATTTACGACT TAATATTCAA GCGATTTATA GCTAGTCAGA TGTCCCATGC AGTTGGTACA 
AAAAGTAGGT ATTTGATAAA GTTAGGCAAG GACGATAATG TCGATGTAGA ATTGTTAAGT 
AATGCTGAAG GCGGATTTAT TAAGGTATAT CCAGTTAAGG TGTATAATTT ACCTGTAGGT 
GAGATTCAAC CTAAAGTTAA TATTACTAAG GGGTCAAGTG AACAATTGCT AAGTTACTCT 
GATGTGATAT CATTAATGAA ATCTAAGGGA ATTGGAAGGC CTAGTACATA TGCAAAAACT 
ATAGAAAATC TAATGAAGCA TGGATATATA GTTAGCAGTA AAAGAAAGTC ATATCTAATA 
GCAACAAACA GAGGTATCTC AGTATATCAA TTTCTAAGCT CCAAATTCTA CGATCTAGTT 
TCCGAAAGTA CCACATCTAG ATTAATGACA AAATTGGACG ACATTGCACT AAGCAAGTTG 
AATGCTTCTA CAGTGTTATT AGAAATATTC AGCGAGATAT CTACCTTAGT AAACCCTCTT 
AAGTCTGAGC AAAATGTATG A 

 

Protein sequence

MINVMYKNSC PNCGGDISGD RLLNGLPCEA CLPYINGIDD VDHISKVKTL YNILLNNDKI 
KNYWNLYYNI TTFETVFKYF RDKTGYEPWS LQKLWLRRLA SNQSFTMSAP TGLGKTTTLM 
TYSVFIGQDV VYIVPTKSLM EQVCKRLEKL GAQVSCGKID QKKVSVITIS YLNKNADSIV 
SLKPNFVVID DADAVIKSGK TTDRLVSLLG IPKDVYESAI QLIRLRNKYY FSNEYTEEVK 
EKIRELELKI AEFKDKISQL VIASATIRPK GIKQKALRLL TGFEPSSIQL YARNIIDAYT 
ENLDLSIVKE LGSGGLILVS KEYGRSKLNE IKKYVEDLGF NAKLAISGRK FLDDFSQGKV 
DILVGSASYY GVAVRGIDEP KRLKYVIYYG VPKIRAKLFD ALSNPFTLLR VGKLIGIDFS 
KLQNKILILN PSEVQLLKFS IIKGESINYH KLEQLRQELL YYMSLVKDKL KEKVEDTLIS 
DSFVITKQNG NYYIVYPDMI TYLQGSGRAS RLYNGGLTLG FSIILVDDRH IFEILEKKMQ 
KLFPNTTFTS LSNTNLSEIK IKLEDSRKEE GNRVHFNIST GLLIVESPTK AKTIAKMFSR 
PSVRIRNKVP VYETIIVDGN QIYVLDIVAS KGHIVDLTLE DIGYYGIKVE DDGTIKPYYD 
LIKKCLDCNK IFSSASDKCP YCGSANLQSA QTTINLLREL ALSVDKVFIA SDPDTEGEKI 
AYDLASFLSP YNSNVYRVVY HEITKKAILE ALRNPKKINT NLVMSQIVRR IEDRWIGFTL 
SNLLKTKFNG HNHGAGRVQT PVLGWIVNKT IKYKSAMGHV VYIDIAGYSI KKYFSEKRKV 
EEYINNLQVA RIEKISEEKI LLSPLPPFTT DTLLIEANMK YKLPANLVMK IAQDLFEAGL 
ITYHRTDSTH ISSVGIEIAK EYLQKQALIK EFVPRSWESS EEGAHEAIRP TRAIDVNELI 
QEIEENPYKY SIRFSKLHLL IYDLIFKRFI ASQMSHAVGT KSRYLIKLGK DDNVDVELLS 
NAEGGFIKVY PVKVYNLPVG EIQPKVNITK GSSEQLLSYS DVISLMKSKG IGRPSTYAKT 
IENLMKHGYI VSSKRKSYLI ATNRGISVYQ FLSSKFYDLV SESTTSRLMT KLDDIALSKL 
NASTVLLEIF SEISTLVNPL KSEQNV