Gene Ssol_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1886 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1675650 
End bp1676621 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content35% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 
Protein accessionACX92098 
Protein GI261602495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.268097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACTA TACAAGGTGT AAACTCTATA GGCAAATTAG ATTTCAAAGT ATTAATAACT 
GATCCAGTAG ATCAATATAT GATAAGAACT TTACAAAATA ATGGACTAAT TGTCGATTAT
AAGCCCGAAA TCACAAGAGA GGAATTACTA AAGATAATAG ACCAGTACCA AGTTTTAATA
GTAAGAAGCA GAACTAAGGT AGACAAGGAG ATAATCCGTT ATGGTGTTAA TCTTAAGATT
ATAGCCAGAG CTGGGATAGG ACTAGACAAT ATAGATACAG AGGAGGCGTC TAAGAGAAAT
ATAAAAATTG TGTATGCGCC CGGGGCTTCT ACAGATTCTG CAGCAGAACT TACTATAGGA
TTACTTATCG CCGCAGCTAG AAAACTATAT GATTCCATGA ATATGGCAAA GGGTGGCATA
TTCAAGAAGA TAGAGGGAAT TGAATTAGCA GGGAAGACAA TAGGTATTGT TGGATTCGGT
AGAATAGGTA CCAAAGTAGC TAAGGTATGT AAGGCATTAG ATATGAACGT AATTGCATAT
GACGTTATTA ATATAAAGGA AAAGGCGAAT ATAGTTGGAG TCAGAGTAGC TGAAAGTTTA
GAAGAATTAC TAAAGAACTC AGATGTGATA ACCTTTCATG TTACAGTAGG TAAAGATGCT
AAGCCAATCC TTAACAAAGA TACATTTAAT TACATTAAAG ATAATGCAAT CATAATCAAC
ACCAGTAGAG CTGTAGTGAT AGATGGGAAA GCATTACTAG AATATATTGA TAAAAAACAC
TTAACTTACG CTACAGATGT TTTGTGGAAT GAACCACCTA AAGAAGATTG GGAGATTAAA
TTATTAAGAC ACGAGAGAGT GATAGTAACT ACTCACATTG GTGCCCAAAC TAAAGAAGCA
CAGCATAGAG TTGCGGTAGT TACAACAGAT AATCTCATTA CTGCTTTAAA GGAAATCGGT
GTTCTCAAAT GA
 
Protein sequence
METIQGVNSI GKLDFKVLIT DPVDQYMIRT LQNNGLIVDY KPEITREELL KIIDQYQVLI 
VRSRTKVDKE IIRYGVNLKI IARAGIGLDN IDTEEASKRN IKIVYAPGAS TDSAAELTIG
LLIAAARKLY DSMNMAKGGI FKKIEGIELA GKTIGIVGFG RIGTKVAKVC KALDMNVIAY
DVINIKEKAN IVGVRVAESL EELLKNSDVI TFHVTVGKDA KPILNKDTFN YIKDNAIIIN
TSRAVVIDGK ALLEYIDKKH LTYATDVLWN EPPKEDWEIK LLRHERVIVT THIGAQTKEA
QHRVAVVTTD NLITALKEIG VLK