Gene Ssol_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1816 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1615814 
End bp1616869 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content37% 
IMG OID 
Product3-dehydroquinate synthase 
Protein accessionACX92031 
Protein GI261602428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGTAA AAGAACACGT GATTAGTCTA CCGAGAAGGG TTTTCGTAGG ACATGATATA 
GTATATGACA TTTCTATCTA CTTCTCACAA CTAGGTGTAA CTCCTCCATT TCTAATAGTG
ACTGGAACAA AATATACTAA AAAAATAGCG GATAAAGTCA TAGAAAATCT CCCAAAAGAT
GCTAAATATG AGGTAGTCGA AATAGATAGT GCTACTTTAG ACGATGTATA TATGGTAGAG
GAAGTTATCA AGAGGATTAG TCCTAGTTTA CTGCTAGGTA TAGGTGGGGG TAAAGTTATA
GATGTCACGA AATATGCTGC ATTTAGAAAT AGCTTAGAAT TCGTTAGTAT ACCTACTTCT
CCATCACATG ATGGAATTAC ATCGCCATTT GCTTCCATAA AGGGGTTACA GAAGCCAGTT
TCAGTAAAGG CAAAAGAACC ATTAGCAATT ATTGCGGACA TAGAAATTCT AAGCCTCTCC
CCAAGAAGAT TAATCAATGC AGGAATAGGT GATACAATAG GGAAGATAAT AGCAGTGAGA
GATTGGAAGT TAGCGGCTAA GTTAAGAGGA GAATATTATG GTGATTACAC AGCGTCTTTA
GCATTAATGT CTGCTAAACA CGCGTTTCAA TGCACTAAGA TTATTAATAA GGACATAAAA
TACGGGGTAA GAATGTTAAT GGAAGCGTTA ATAAGTAGCG GAGTAGCCAT GGGAATGGCT
GGAAGCACCA GACCAGCAAG TGGTTCTGAA CATCTATTTG CCCATGCAGT TGAGTTAATA
CATCCAGAGG GAATTTTGCA TGGTGAACTA GTTGGTTTAG GAACAATTAT TATGGCTTAC
TTGCATGGTA TAAATTGGAA AATAATAAGA AATAGACTTA AAAAAATAGG ATTCCCAGTG
AAAGCGAAAG ACTTAGGTCT TTCTGATGAG GAAGTGATAA AGGCCTTAAC AATAGCCCAT
ACAATAAGAC CAGAGAGGTA CACAATTTTA GGGGATAGGG GTCTAACTTG GAGTTCTGCA
GAAAAAATAG CAAGAGTAAC AAAAATTATA GATTAA
 
Protein sequence
MNVKEHVISL PRRVFVGHDI VYDISIYFSQ LGVTPPFLIV TGTKYTKKIA DKVIENLPKD 
AKYEVVEIDS ATLDDVYMVE EVIKRISPSL LLGIGGGKVI DVTKYAAFRN SLEFVSIPTS
PSHDGITSPF ASIKGLQKPV SVKAKEPLAI IADIEILSLS PRRLINAGIG DTIGKIIAVR
DWKLAAKLRG EYYGDYTASL ALMSAKHAFQ CTKIINKDIK YGVRMLMEAL ISSGVAMGMA
GSTRPASGSE HLFAHAVELI HPEGILHGEL VGLGTIIMAY LHGINWKIIR NRLKKIGFPV
KAKDLGLSDE EVIKALTIAH TIRPERYTIL GDRGLTWSSA EKIARVTKII D