Gene Ssol_1794 details

Gene Information

• Locus tag: Ssol_1794
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 1599437
• End bp: 1600138
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 35%
• Product: Ribosome maturation protein SBDS-like protein
• Protein accession: ACX92010
• Protein GI: 261602407

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.216048
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAGG AGCGTGATTA TGTAATAGTT AAATATGAGT CACATGGAGA GAGGTTTGAG 
ATATTAGCTA AGCCAAAAGA AGCATTAGCT TTTAGAAGTG GGAAGAGCAT AAGTCTTTCT 
GATGTAGTGG TTTCTGATAC TATTTATAAG GACGTAAAGA AAGGTTTAAA AGCGTCTCCA 
GCATCACTTA AAAAAGTTTT TGGTACTACC GATTTCGAGA CAATTGTAAA AGAAATTTTA 
CTTAAAGGTG AATTACCAGT AACTGCAGAA CAAAGGAAAG AAATGCTAGA AACTAAGAGA 
AAGCAAATAA TTGATTTTAT TCATAGGAAC GCAGTTGATC CAAAAACTAA TTTGCCAATT 
CCGCCAACCA GATTAGAGAT GGCAATGGAA CAAGCTAGAA TACAAATCGA TTTAAACAAA 
GACGTGGAAG CACAAGCTAT GCAAATAGTA AAGGAGATTT CTAAGATAAT TCCAATTAAA 
ATAGCAAGGG CTTTGCTTAG TATTAAAGTA CCATCAGAAT ATAGCTCTAA GGTTAAATCT 
CAATTGCATA ACTTAGGGGA GGTAAAAAAG GCCAATTGGT TAGAAGATGG TACGCTACTT 
GCGGAATTGG AAATACCTGC CGGTGCACAG CAAGACGTTA TAGATAAGTT AAATAGTCTT 
ACAAAAGGAG AAGTTGAAGT TAAAGTATTG CAAGTGAGAT GA 

 

Protein sequence

MTKERDYVIV KYESHGERFE ILAKPKEALA FRSGKSISLS DVVVSDTIYK DVKKGLKASP 
ASLKKVFGTT DFETIVKEIL LKGELPVTAE QRKEMLETKR KQIIDFIHRN AVDPKTNLPI 
PPTRLEMAME QARIQIDLNK DVEAQAMQIV KEISKIIPIK IARALLSIKV PSEYSSKVKS 
QLHNLGEVKK ANWLEDGTLL AELEIPAGAQ QDVIDKLNSL TKGEVEVKVL QVR