Gene Ssol_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1680 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand+ 
Start bp1508736 
End bp1509404 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content34% 
IMG OID 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionACX91897 
Protein GI261602294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.544403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA GTAGAGTAAT ATTAGCAATG GATAAACCTC TCTCATATCA AGTTCTTAAA 
GAGATGGAAA ATGAGTTATA TGGGATAAAA GTTGGTTTAC CTTTAGTTTT AGATCTAGGA 
GTGGATAAAA CTAGAGAGCT CTTAATTGGT TTAGACGTGG AGGAAATTAT TGTTGATTTT 
AAGCTTGCAG ATATCGGATA CATAATGAAA AGCATAGTTG AAAGATTATC TTTCGCCAAC 
TCGTTCATAG CACATTCCTT TATAGGCGTT AAGGGATCTC TAGATGAATT AAAAAGATAT 
CTTGATGCAA ACTCTAAAAA TTTATACTTA GTTGCCGTAA TGTCACATGA AGGATGGAGT 
ACGTTATTCG CAGACTATAT TAAAAACGTT ATAAGAGAGA TAAGCCCAAA AGGAATAGTA 
GTTGGAGGGA CTAAATTAGA TCATATAACG CAGTATAGGA GAGACTTCGA AAAAATGACC 
ATAGTCTCTC CGGGTATGGG TAGTCAAGGT GGAAGTTATG GCGATGCAGT ATGTGCTGGA 
GCGGATTATG AAATCATTGG AAGAAGTATT TATAATGCAG GGAATCCATT AACAGCATTA 
AGAACTATAA ATAAGATTAT CGAGGATAAG GTGATGAAAT GTAAAGGAGC AATTTTTAGG 
AAAAAATGA
 
Protein sequence
MLKSRVILAM DKPLSYQVLK EMENELYGIK VGLPLVLDLG VDKTRELLIG LDVEEIIVDF 
KLADIGYIMK SIVERLSFAN SFIAHSFIGV KGSLDELKRY LDANSKNLYL VAVMSHEGWS 
TLFADYIKNV IREISPKGIV VGGTKLDHIT QYRRDFEKMT IVSPGMGSQG GSYGDAVCAG 
ADYEIIGRSI YNAGNPLTAL RTINKIIEDK VMKCKGAIFR KK