Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1561 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1418896 |
End bp | 1420098 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | transposase, IS605 OrfB family |
Protein accession | ACX91788 |
Protein GI | 261602185 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.786289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCC TTGTGTTTAA ATACTTCTTT GCCAAAATTT CCTTGATGGC TAGGAGGGTT AAAGCGATCA GAGCTACAGT TTCGATGAAG ATCGCAGTCT CAGACTCTCT CCTAGCCCTC GTTAATAACT ACGTTAAGGC ACTCCGTTTC ACCCTATTTT GGTTGAAAGA AAATGTCCCG AATCCTAATG AAAAGGGAGT GATTTCGAAA GTCCACGAGG AGTTGTACGA GAAGTTAAGG GAGGAGTACA ATCTACCATC AAAGGTTGCT GAGGATTGCT ATAGGGAAGC TCTCGCGACG TACAAGGGTT GGTATAATAA TCCTAAGAAG GGTAGGTTTC CGAGAGTGTA CAAACCTACG GTGTGGTTAA CGCCAAAAGC GAGTTATAAT GTGGACTTCG ACAAGATGAT TGTTAGGATT GCAAGTGTTG GTGAACTTCC AATCTTGGGA TATCCTAGAA ACCTCGAGGA GTACACGAGT TGGAGGATGA GGGAGGCTAG GTTAGTGATC AAAGATGGGA AGGCTTTTCT AAAAGTTGTT TTTGAGAAAG AGGAGGAGAA GGTTGAGCCA AAGGAAAGTG TTGCCGTAGA TATAAACATG GCTGAGATAG TTGTAGGGAA GGACGACGAG CACTACGTTA GGATCCCAAC TCGCCTTGAT GAGATTCACC AATGGAAGTC ATTAGCTGAG AATCTACAAA AGAAGTATCC AAGGAGGTGG AGGGAGAATA AGAGGATCTT GTATAGAGTC CGTTCTTTCC ATCTAAAGGC TAAGAGAATT ATGGAGGATT ATGCTAGGAA GGTTGGGAAG TGGGTTGTTG AAATCGCTGA AGATTTCGGT GCCAATGTTA TTAAGTTGGA GAGTCTTAAG AATCTTGTCA AGAATGTTGA TAAATTGCCT AAGGAGTTTA GGGATAAGTT GTATCTGATG CAGTATCGTA GGATTCAGTA TTGGATTGAG TGGCAAGCTA AGAAGCACGG TATTCTAGTT CAGTATGTTA ATCCCAGTTA TTCTTCCGTC TCATGCCCTA AGTGTGGTAA AAGGATGGAA GAAAAAGGAT ATCGTTGGTT TAGGTGCAAT TGCGGTTATG AAAATGATCG TGACGTTATT GCAATAGTTA ATTTAAACAG GAGGGGGTCT CTGACCCTCT CGACTGCCCA CCAAATGAGA GATGTAAGCC CGAATCGATG GTGGGAACGA TGA
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Protein sequence | MDSLVFKYFF AKISLMARRV KAIRATVSMK IAVSDSLLAL VNNYVKALRF TLFWLKENVP NPNEKGVISK VHEELYEKLR EEYNLPSKVA EDCYREALAT YKGWYNNPKK GRFPRVYKPT VWLTPKASYN VDFDKMIVRI ASVGELPILG YPRNLEEYTS WRMREARLVI KDGKAFLKVV FEKEEEKVEP KESVAVDINM AEIVVGKDDE HYVRIPTRLD EIHQWKSLAE NLQKKYPRRW RENKRILYRV RSFHLKAKRI MEDYARKVGK WVVEIAEDFG ANVIKLESLK NLVKNVDKLP KEFRDKLYLM QYRRIQYWIE WQAKKHGILV QYVNPSYSSV SCPKCGKRME EKGYRWFRCN CGYENDRDVI AIVNLNRRGS LTLSTAHQMR DVSPNRWWER
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