Gene Ssol_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1394 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1292025 
End bp1293269 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content37% 
IMG OID 
Productphosphonopyruvate decarboxylase-related protein 
Protein accessionACX91628 
Protein GI261602025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCAAT ATAAAATTCT TTTAATAGTC GCAGATGGTT TAGGAGATAG ACCGGTATCT 
AAATTAAATG GATTAACCCC ATTAGAAGCT GCCAATAAAC CAGCCATAAC TGACTTGCTT
AAAAACTCAA TGATTGGCTT AATGGATCCA ATATCACCGG GTATAATTCC TGGGAGTGAT
ACTTCACATC TATCAATATT TGGCCTAGAT CCACATGTTT ACTATAGGGG AAGAGGGGCT
TTCGAGGCAT TAGGAGCTGG AGCTACGCTT AGCCACGGAG ATGTTGCATT TAGAGGAAAT
TTCGCTACAG TGAATAATGA TCTAGTTGTA GTTGATAGGA GAGCAGGAAG GAAGCTTGAA
GAAGGAGAGC AGCTAGTAAA GGAATTAAAC GAAAAAATTA AAGAGATAAA TGACGTAAAG
ATTAAATTTT ATAAAGGAAC AGAGCATAGA ATAGCAGTAG TATTATCCGG GAAAGGAATA
AGTGATAAGG TTAGTGATAC TGATCCTCAT CATGAGGGCT TGAAAGTTCT AGAAAGTAAA
CCATTAGAAG ATTCTAACGA AGCTATAAGA ACAGCCGAGA TCATCAATAT ACTTACGCGG
AAAGTTTTTG ATGTATTAAA TTCCTCTGAA ATAAATAAGA GAAGAATAGA ACAAGGAGAG
AAGCCTGCTA ACATTGTGCT ATTGAGAGGA GCCGCTCATT ACGTTAAGTT ACCGCCATTT
TCAAGCTATA CCAAACTTAA AGCTGCGGCT GTTTCGGCTA CAGCACTCAT AAAAGGAATA
TGTAGAGAAC TCGGTATGAA CGTTATAACG CCATCGGGTG CTACTGGAGG TATAGATACT
AATTATAACG CCAAAGCTAA AGCTGCAATA GAATTATTAA AGGAGAATGA TTTCGTTTTC
CTACATATTA AAGCTACAGA TGCAGCATCA CATGATGGAT TAGTAGAAGA AAAAGTAAAG
GCAATAGAGA GGATAGATAG AGTAATAGGA GCTATTATAG ACAATATCGG AAGAGATAAT
TTAATATTAA TGTTTACTGG AGATCACGTT ACCCCAGTAG AAATTAAAGA ACATACTGGA
GATCCAGTTC CAGTACTTCT CTACGTACCT TATCCAATTA TTAACGATAA TGTAGGAGAT
TTTAACGAGA AGGAGGCTAG AAAGGGAAGC CTAAGAATAA GAGGATTAGA CGTAACAAAT
ATATTGTTAA ACTACTCTAA TAGAGCAGAG AAATACGGTT CATGA
 
Protein sequence
MKQYKILLIV ADGLGDRPVS KLNGLTPLEA ANKPAITDLL KNSMIGLMDP ISPGIIPGSD 
TSHLSIFGLD PHVYYRGRGA FEALGAGATL SHGDVAFRGN FATVNNDLVV VDRRAGRKLE
EGEQLVKELN EKIKEINDVK IKFYKGTEHR IAVVLSGKGI SDKVSDTDPH HEGLKVLESK
PLEDSNEAIR TAEIINILTR KVFDVLNSSE INKRRIEQGE KPANIVLLRG AAHYVKLPPF
SSYTKLKAAA VSATALIKGI CRELGMNVIT PSGATGGIDT NYNAKAKAAI ELLKENDFVF
LHIKATDAAS HDGLVEEKVK AIERIDRVIG AIIDNIGRDN LILMFTGDHV TPVEIKEHTG
DPVPVLLYVP YPIINDNVGD FNEKEARKGS LRIRGLDVTN ILLNYSNRAE KYGS