Gene Ssol_1383 details

Gene Information

• Locus tag: Ssol_1383
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1284672
• End bp: 1285451
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 34%
• Product: proliferating cell nuclear antigen PcnA
• Protein accession: ACX91617
• Protein GI: 261602014

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0929046
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATATC TTAAATCTTT TGAAAGGAAT ATAAGATTGA TTAACATGAA AGTAGTTTAC 
GATGATGTAA GGGTTCTTAA AGATATCATA CAAGCCTTAG CCAGGTTAGT TGATGAAGCG 
GTATTAAAGT TTAAGCAAGA CAGCGTAGAG TTAGTCGCGC TAGATAGAGC TCATATTTCC 
CTTATATCAG TAAACTTGCC TAGAGAGATG TTTAAGGAGT ATGATGTAAA TGACGAATTT 
AAATTTGGCT TTAATACTCA ATATTTAATG AAAATTTTGA AAGTAGCCAA GAGAAAAGAG 
GCAATAGAGA TAGCTAGTGA ATCTCCAGAC AGTGTTATCA TAAATATTAT AGGGAGTACT 
AATAGAGAAT TTAATGTTAG GAACCTAGAG GTATCTGAAC AAGAGATACC AGAGATCAAT 
CTACAATTTG ATATATCAGC GACTATTTCC TCAGATGGTT TTAAGTCTGC TATATCAGAA 
GTTTCCACAG TTACGGATAA TGTAGTTGTA GAGGGCCACG AAGATAGAAT ACTAATTAAG 
GCTGAAGGTG AAAGCGAGGT TGAAGTTGAA TTTTCAAAAG ATACCGGAGG TCTTCAAGAT 
TTGGAATTCT CTAAAGAGTC CAAGAATTCA TATTCCGCGG AATATCTTGA TGACGTCTTA 
TCTTTAACTA AACTTTCAGA TTATGTGAAG ATTTCATTCG GTAATCAGAA GCCCCTTCAG 
TTATTCTTTA ATATGGAGGG AGGGGGGAAA GTTACTTATT TATTAGCTCC AAAAGTTTGA 

 

Protein sequence

MIYLKSFERN IRLINMKVVY DDVRVLKDII QALARLVDEA VLKFKQDSVE LVALDRAHIS 
LISVNLPREM FKEYDVNDEF KFGFNTQYLM KILKVAKRKE AIEIASESPD SVIINIIGST 
NREFNVRNLE VSEQEIPEIN LQFDISATIS SDGFKSAISE VSTVTDNVVV EGHEDRILIK 
AEGESEVEVE FSKDTGGLQD LEFSKESKNS YSAEYLDDVL SLTKLSDYVK ISFGNQKPLQ 
LFFNMEGGGK VTYLLAPKV