Gene Ssol_1305 details

Gene Information

• Locus tag: Ssol_1305
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1207119
• End bp: 1210505
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• Translation table: 11
• GC content: 33%
• Product: NADH/Ubiquinone/plastoquinone (complex I)
• Protein accession: ACX91541
• Protein GI: 261601938

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCCTC TCTCCTTTAT AATGTTAATA ATATCCTTTA TACTTGCAGT TAGTATATTT 
TTTGTTAGAT CAAGAGTAGC CTCATTTATT TTGAGTTTTG TATCAATAGC CATAAATATC 
CCATTTTTGG TTTTTAGAGG TATTTTTGAA AACATATTCG TCTCGAAATA TGTTGGAGAC 
TTCGGAATTG TAGTAAACAA TTTCAACTAT CCATTTATAA TAACTATTAT AATTATTACA 
CTATTGTCCG CAATATATTC CTTAAGGTAT ATGGAACATA AGTTTGATGA GGAGAGAAAA 
AGTAGCTGGG GTCTTTACTA TGCTTTGTAT ACTTTATTTG CCCTTTCGAT GCTATACACT 
GTACTATCGA CTAATCTACT GGAATTATAT ATATTTTTGG AGATTTCGTT AATTTCGTCA 
TTTTTACTGA TAGCGCTTTA TGGGTATGGT GATAGACGCA GAATAAGCCT TATGTATTTC 
ATATGGACGC ACATTGGTAC AATATTACTC TTGGCTTCAA TAATAGTAAT AGGTCTTTCT 
ACAGGCTCTA TGAACATTTA CGTTGATGCT TATACTTTTG CCAATTATTC AACTATATCC 
TATGGAATCC TAGTATTTAT AATAGCAGTA GTTGGTATGT TTGTAAAAGG TGCTCAAGCT 
GGTTTCAACA TATGGCTACC GTATGCCCAT GGCGAAGCAC CAACTCCTAT TTCAGTATTG 
TTAAGTCCAA ATATGGTTGG TTTAGGAATA TTTGTAGTAA TAATTTACTA TTATCTATTT 
CCCACTATGT CCTTCTTAGC TCCCATATTC ATAGCTTGGG CCATTATCAC GATGATTTAT 
GGTGGTATTA ACGCTCTGGC TCAAAAAGAC TTTAAGAGGT TTTTAGCGTA TTCTAGTGTT 
TCTCAAATGG GTTATATGCT ATTAGGTGCT TCTATAGCAT TTTTAAGCGG ATTATCAAAT 
TCCATTATTT CGTTGCCTAT AGGAATATTG GCGAGTATTT TGATCTATGT ATCTCATGGT 
TTTGGCAAAG CTATATTATT CATGAGCGCT GGTGCGTCAA TTACCGAACT TAATGAAAGG 
AATATTGAAA AGTTAGGGGG ACTATATCTT TCTTCTCCCC TTCATTCAAC ATTAGCGTTT 
ATAGGCGCAT TGAATCTTTT GGGTCTGCCT CCTACAATTG GACTGATAAG TGAAGCATTG 
TTGATATTTT CATTAGGTAC TATATTAGAT AAGATAGGAA TAGTAGGTTT TATAGTGATA 
GTAGCTTTTA TAATGATCGC AATAGGTACC TCTTCGGCTT ATATAGGTTA TTTGTTCAAG 
ACTGTGTACG CAGGTAAAAA GGAAACCAAG AATATTGATA ACGTAAAAGA GTATTCTATT 
CCAATGTTAT TAATAGGAAT ATTTAGCATA ATTACGTTCT TTATTCCTCA ATATGTATCA 
CCTTCTTTAG TATTCACGTC ACTGTTTTCA AATTCTACAA TTTTGCCATT CATAGCGTTC 
TTGCCCGTTT TAGGTTCGCT AATCGCGCTA ATAACTCCAA AGTCATTAAA TCAAGATTTG 
AGAGGCGCAA TAGTAGTGGT ATCAATAGGT ATTTCAATGG TCTTATCTGC TGTGTTATTA 
GTTAATAATT TAGGAAAACC CTTATTCGGA CACCCTCAGT TATCATATTC ATTTGGTTAT 
CTACAATTTA GTGCTAATTT GCTTCAATCC ATTTTAGCCC TATTTGTATC TTCACTATCA 
TTCTTTATAG CATTATATAG TATAGGATAC ATGAGAGAAG ATAACGTTTT AAGAAGGTAC 
TGGGGTTTCT TTGGACTTTT CGTAACATCA ATGTTATCTG TTGTTTTAGC TAATAACGTT 
TTATTATTTA TTGCTGGATG GGAGGGAACT AGTCTAGCAT CTTATGGTTT AATTAGTTAC 
TGGCTAGATG ACAATGAAAG GAATGTAGTT GGAGATTTTG GAAGAAGAAT ATTCGGAATC 
GAAAATGTCT CCAAACCAAC AACTAGTGGG ATTAGAGCTT TAATTTTCAC TCGTGTAGGT 
GATGTTGGCT TGCTAGCGGT ACTAGGATAT TTGCTTTCAT TATCAAGTTA CAATTATATC 
TTATATCCCA TTTCAAATGT ATCGTCCACA GTATTTTCTG CATTGTACGC TGTAGCCTCA 
CATCCAGAAG GGTGGTTAAT ATTGCTAATA TTCTTTTTAG GTGGGCTTGC TAAAAGTGCA 
CAATTTCCTT TCACGCAATG GCTATTGACT GCTATGACTG GTCCCACACC AGTTAGTGCT 
CTAATACACG CAGCTACTAT GGTTAATTTA GGGGCTATTC TTACATTCCT CACCTATCAA 
TTTATACCAA TAAATTCTAA CACTTATTTG TTCTTTGCCA TAATGGTAGG AATAACATTA 
TTTACAGCAT TATACACAAG TATTAACGCT CTAGCCTCAA ATGAACAAAA GGTAATTTTA 
GCTTATTCTA CAGCGGATCA AATATCGTTA ATGATATTCT CATCTTCTTT AGGTGCTTTA 
CTTGGAAATG TAAGTTTAGG AATAATAATA GGGCTTATAC AAATGTTCGC ACACGGACTA 
TATAAGGCAT CTCTCTTTAT GAACGCTGGT TCCGTAATAC ATTACACAGA AAGTAGATAT 
GTAGCTTCAA AACCATTATT ATATAAGGAG ATTCCTTCTG TGTTTATTTT ACAACTAATT 
GCTGCATTAA ACCTAGCCAA TTTGCCGCCT TTAATAGGAT TTTGGGCCCA CAATATCATA 
GGTAATTTAG CTAGTAGTAC TTCAACTACG ATATTTTACT TGTATATAAT TCTGGAATTT 
CTAGGTTCAA TCTATATATT AAGATATATT GCAAGAACGT TCTTATGGAA GGGAGAGACA 
GATAAGACTC ATGAACATGG GCACTTAAGT ATCTTAATGG TTATAAGTCC TGCATTCTTG 
ATATTAGGAT CAATAATACT AGGTGTACTT TACTTTAATC TGGCGACCTT CTTTAATATT 
ATACAATTTT CTGAGATAGA TTTCCTTAGT TTAACATTAT CTATAATAGG TTGGATAATC 
GCTTTTGCCA TATATACTAG ATATTTGAAT TTAAGTTCTG TAAAGCCCCT AATAGATTTT 
GTTTATTATG GTTGGTATGT GAATCCAGCT TTTGATAAAT TTGGATATCT TTTCAAAGAT 
TTTGCTGGTG CTCTATTCAA AAACTTTGAG AGAGGAGTTA TCGATTTAGG GCTGAACGAG 
AGATTACCTA AATCTATAGT AAACTTTGGA TCAAGAATCT ATAATGTAGT CGAGGATCAT 
ATTCTTGGGG ATTATATCAT GTTATATGCA TGGGGTATAG TTTTACTTTT AATTATAGTT 
TTGATTCTAT TCGGGGTGAT TGGATAA 

 

Protein sequence

MFPLSFIMLI ISFILAVSIF FVRSRVASFI LSFVSIAINI PFLVFRGIFE NIFVSKYVGD 
FGIVVNNFNY PFIITIIIIT LLSAIYSLRY MEHKFDEERK SSWGLYYALY TLFALSMLYT 
VLSTNLLELY IFLEISLISS FLLIALYGYG DRRRISLMYF IWTHIGTILL LASIIVIGLS 
TGSMNIYVDA YTFANYSTIS YGILVFIIAV VGMFVKGAQA GFNIWLPYAH GEAPTPISVL 
LSPNMVGLGI FVVIIYYYLF PTMSFLAPIF IAWAIITMIY GGINALAQKD FKRFLAYSSV 
SQMGYMLLGA SIAFLSGLSN SIISLPIGIL ASILIYVSHG FGKAILFMSA GASITELNER 
NIEKLGGLYL SSPLHSTLAF IGALNLLGLP PTIGLISEAL LIFSLGTILD KIGIVGFIVI 
VAFIMIAIGT SSAYIGYLFK TVYAGKKETK NIDNVKEYSI PMLLIGIFSI ITFFIPQYVS 
PSLVFTSLFS NSTILPFIAF LPVLGSLIAL ITPKSLNQDL RGAIVVVSIG ISMVLSAVLL 
VNNLGKPLFG HPQLSYSFGY LQFSANLLQS ILALFVSSLS FFIALYSIGY MREDNVLRRY 
WGFFGLFVTS MLSVVLANNV LLFIAGWEGT SLASYGLISY WLDDNERNVV GDFGRRIFGI 
ENVSKPTTSG IRALIFTRVG DVGLLAVLGY LLSLSSYNYI LYPISNVSST VFSALYAVAS 
HPEGWLILLI FFLGGLAKSA QFPFTQWLLT AMTGPTPVSA LIHAATMVNL GAILTFLTYQ 
FIPINSNTYL FFAIMVGITL FTALYTSINA LASNEQKVIL AYSTADQISL MIFSSSLGAL 
LGNVSLGIII GLIQMFAHGL YKASLFMNAG SVIHYTESRY VASKPLLYKE IPSVFILQLI 
AALNLANLPP LIGFWAHNII GNLASSTSTT IFYLYIILEF LGSIYILRYI ARTFLWKGET 
DKTHEHGHLS ILMVISPAFL ILGSIILGVL YFNLATFFNI IQFSEIDFLS LTLSIIGWII 
AFAIYTRYLN LSSVKPLIDF VYYGWYVNPA FDKFGYLFKD FAGALFKNFE RGVIDLGLNE 
RLPKSIVNFG SRIYNVVEDH ILGDYIMLYA WGIVLLLIIV LILFGVIG