Gene Ssol_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1284 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1190084 
End bp1191328 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content34% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionACX91520 
Protein GI261601917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGTAA AGATTTATCC ATCAAAGATT AGTGGAATAA TAAAAGCTCC TCAATCAAAA 
AGTCTAGCTA TTAGGTTAAT TTTTCTTTCA CTTTTCACTA GAGTATATCT TCATAACTTA
GTTCTATCGG AAGATGTTAT AGACGCTATA AAATCAGTAA GAGCATTAGG AGTAAAGGTA
AAAAACAATT CTGAATTTAT ACCTCCAGAG AAATTAGAAA TTAAGGAGAG GTTTATAAAA
TTAAAAGGTT CCGCTACTAC TCTTAGAATG CTTATTCCAA TATTAGCCGC AATAGGCGGA
GAAGTGACAA TTGATGCAGA TGAGAGTTTA AGAAGGAGAC CTTTAAACAG AATCGTACAA
GCATTAAGTA ACTACGGTAT ATCCTTTTCT TCTTACAGTT TGCCTTTGAC TATCACGGGA
AAGTTAAGTA GTAATGAGAT AAAGATTTCT GGTGATGAGA GTAGTCAATA TATTTCTGGC
TTAATATACG CACTTCATAT TCTAAATGGC GGTAGTATTG AAATATTGCC CCCCATTTCA
TCTAAAAGTT ATATTCTGCT TACAATAGAT TTATTTAAGA GATTTGGTTC TGATGTTAAG
TTTTATGGTA GTAAGATTCA TGTTAATCCC AATAATTTGG TTGAATTTCA AGGCGAAGTG
GCGGGAGATT ATGGTTTAGC CTCGTTTTAC GCGCTTTCTG CATTAGTTAG TGGTGGAGGA
ATTACAATAA CTAATTTGTG GGAGCCGAAG GAATATTTTG GTGATCATAG TATTGTTAAA
ATATTTAGTG AGATGGGCGC TTCCAGTGAA TATAAAGACG GTAGATGGTT TGTCAAGGCT
AAAGATAAAT ATTCTCCCAT AAAAATTGAT ATAGATGACG CACCTGACCT GGCTATGACA
ATTGCGGGAT TATCTGCAAT AGCGGAGGGA ACAAGTGAAA TTATAGGGAT CGAAAGATTG
AGGATTAAGG AAAGTGATAG AATTGAAAGT ATAAGGAAAA TCTTAGGATT ATATGGTGTA
GGTAGTGAAG TAAAGTATAA TTCTATTCTG ATATTCGGAA TTAACAAGGG TATGTTAAAC
TCTCCAGTTA CAGACTGTTT GAATGATCAC AGAGTTGCTA TGATGTCGTC AGCCTTAGCT
TTAGTGAATG GTGGGGTAAT TACATCAGCT GAATGTGTAG GTAAAAGTAA TCCTAATTAC
TGGCAAGATT TATTATCACT AAATGCGAAG ATTTCTATTG AATGA
 
Protein sequence
MIVKIYPSKI SGIIKAPQSK SLAIRLIFLS LFTRVYLHNL VLSEDVIDAI KSVRALGVKV 
KNNSEFIPPE KLEIKERFIK LKGSATTLRM LIPILAAIGG EVTIDADESL RRRPLNRIVQ
ALSNYGISFS SYSLPLTITG KLSSNEIKIS GDESSQYISG LIYALHILNG GSIEILPPIS
SKSYILLTID LFKRFGSDVK FYGSKIHVNP NNLVEFQGEV AGDYGLASFY ALSALVSGGG
ITITNLWEPK EYFGDHSIVK IFSEMGASSE YKDGRWFVKA KDKYSPIKID IDDAPDLAMT
IAGLSAIAEG TSEIIGIERL RIKESDRIES IRKILGLYGV GSEVKYNSIL IFGINKGMLN
SPVTDCLNDH RVAMMSSALA LVNGGVITSA ECVGKSNPNY WQDLLSLNAK ISIE