Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1264 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1172028 |
End bp | 1173830 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | ACX91500 |
Protein GI | 261601897 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.931219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAGTTG CTGTAATAAA TTATGACTTT TGTAAGCCAG ATAAATGTAA CTTAGAGTGT ATAAATTTCT GTCCTGTTGA TAGGTCTGGA GGAAAAGCCA TAGAACTGTC GGAAATTGTT AAGGGAAAAC CAGTAATTTA TGAAGAAACT TGTATAGGTT GTGGAATATG TGTAAAGAAA TGTCCATATG AAGCTATATC AATTGTTAAT CTTCCAGACG AGTTAGAAGG AGAGGTTATA CATAGATACA AAGTAAATGG GTTCAAATTA TTCGGCTTAC CTACACCTAA AAATAATACG ATATTAGGAG TATTAGGGAA GAATGGAGTA GGGAAAACCA CAGTACTTAA AATACTAGCT GGTGAAATAA TCCCAAATTT TGGAGATCCA AATTCCAAAG TAGGTAAAGA CGAAGTGTTA AAAAGGTTTA GAGGAAAAGA AATTTATAAT TATTTTAAAG AATTATATAG TAATGAACTA AAAATAGTAC ATAAGATTCA ATACGTTGAG TACGCTTCAA AATTCCTTAA AGGTACGGTG AATGAAATTT TGACAAAGAT AGATGAAAGA GGGAAAAAGG ATGAAGTTAA AGAACTTCTA AACATGACTA ATCTTTGGAA TAAGGATGCT AATATACTTT CTGGAGGAGG ACTTCAGCGA TTATTAGTAG CTGCTTCACT ATTGAGAGAA GCAGATGTAT ACATATTTGA CGAACCTTCT TCTTATCTAG ATGTTAGGGA AAGAATGAAT ATGGCTAAGG CAATTAGAGA ATTGTTAAAG AATAAATATG TTATAGTTGT GGATCATGAC TTAATAGTTT TGGATTATCT TACAGATTTA ATACATATAA TCTATGGAGA AAGTTCAGTA TATGGAAGGG TTTCAAAATC TTATGCAGCT AGAGTAGGGA TAAATAATTT TCTTAAAGGA TATTTACCAG CTGAAAATAT GAAAATAAGA CCAGACGAAA TAAAGTTTAT GCTAAAAGAG GTTAGTGACC TAGACCTTTC CAAAGATCTA AAAACAAAAA TGAAATGGAC TAAGATAATC AAGAAGTTAG GTGATTTTCA GTTAGTAGTA GATAATGGAG AGGCTAAAGA GGGAGAAATA ATCGGAATTT TAGGACCAAA CGGAATTGGA AAGACAACTT TCGCAAGAAT ATTAGTTGGC GAAATTACAG CAGATGAAGG ATCTGTAACC CCAGAAAAAC AAATATTATC TTATAAACCA CAACGAATCT TTCCTAACTA TGATGGAACT GTTCAACAAT ACTTAGAAAA TGCGAGTAAA GACGCTCTTT CTACCTCATC CTGGTTCTTC GAAGAGGTAA CTAAAAGGCT TAACTTGCAC AGACTGCTGG AATCTAATGT GAATGATCTA AGTGGAGGCG AATTACAGAA ATTATATATA GCAGCTACTT TGGCAAAAGA AGCTGATCTT TACGTTTTGG ATGAACCTTC CTCTTATCTC GATGTCGAAG AGAGATATAT AGTCGCTAAA GCTATAAAGA GAGTTACGAG GGAGAGGAAA GCGGTAACTT TTATCATAGA TCACGATCTT TCAATACATG ATTATATAGC GGATAGAATT ATCGTTTTCA AAGGAGAACC AGAAAAAGCT GGATTAGCAA CATCTCCGGT AACGTTAAAG ACGGGAATGA ATGAGTTTTT GAGAGAATTG GAGGTAACGT TCAGGAGAGA TGCAGAGACC GGAAGACCTA GAGTAAATAA GATTGGGAGT TACTTAGATA GAGTCCAGAA AGAAAGAGGA GATTATTACT CCATGGTTCT TTCTACCCAG TAA
|
Protein sequence | MRVAVINYDF CKPDKCNLEC INFCPVDRSG GKAIELSEIV KGKPVIYEET CIGCGICVKK CPYEAISIVN LPDELEGEVI HRYKVNGFKL FGLPTPKNNT ILGVLGKNGV GKTTVLKILA GEIIPNFGDP NSKVGKDEVL KRFRGKEIYN YFKELYSNEL KIVHKIQYVE YASKFLKGTV NEILTKIDER GKKDEVKELL NMTNLWNKDA NILSGGGLQR LLVAASLLRE ADVYIFDEPS SYLDVRERMN MAKAIRELLK NKYVIVVDHD LIVLDYLTDL IHIIYGESSV YGRVSKSYAA RVGINNFLKG YLPAENMKIR PDEIKFMLKE VSDLDLSKDL KTKMKWTKII KKLGDFQLVV DNGEAKEGEI IGILGPNGIG KTTFARILVG EITADEGSVT PEKQILSYKP QRIFPNYDGT VQQYLENASK DALSTSSWFF EEVTKRLNLH RLLESNVNDL SGGELQKLYI AATLAKEADL YVLDEPSSYL DVEERYIVAK AIKRVTRERK AVTFIIDHDL SIHDYIADRI IVFKGEPEKA GLATSPVTLK TGMNEFLREL EVTFRRDAET GRPRVNKIGS YLDRVQKERG DYYSMVLSTQ
|
| |