Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1259 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1168295 |
End bp | 1169917 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | |
Product | protein of unknown function DUF87 |
Protein accession | ACX91495 |
Protein GI | 261601892 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAA ATCTTTGGAT TCCTATACTA CTCATAATTC TGGGAATTGG TTTTCTGTTT CATAATTTAA TTAATATTAA CTTAATGTTT TTCGTATTTC CAATTATAAT GATAGTGGTT ATCTCGTTTA TTTTCAGAAA TTCTCTTAAA GTAAAAATAA ATAAATTCAT TCTTAAAAAT GGAATCTTCC AGATAATGTA TGATAATACT TGCATTTGTG GAGTTGCTAT GAAAATAACG GGTAAAATCG AACCGACTTC AAATAAGAAC GATATAGAAA AAGAACTTAA AGACTTCATA AATGCAATAG CTAGAAAAGA CTCAGAATTC AAGTTTATAA TATTTACTAT AGTAGAAAAA AATAAACTAG GTTCATCTAT AATAATTTAT AGAATACTCC AACATTCCAC CGATATAGAG TTGGACAGTT TCATGGAAGA AGTTAACAAT TTATTAGTGT TAGCAAAAGC TATAGCTCCA CATCTAGAGT TTAAAATTAT TCAACCATCA AAAAATGTTC TTCCAATTCC AATGGCTTTT GGGAACTACC CTTTTCTAAC AGTGTCCGAG ATAACTTACA CCAATCCTAT TAATTCTAAT ATTGTGTCAG AGGATTTTGA TGTAGAGATA GGAGAAGCCA CAAACGGAAC AGTAACATCA AGGGTAGGAA TAAGAGTAAA AGACATTACG AGACATATAG GAATCTTTGG AAGTACTGGA TCTGGAAAGA CGAATACTGC AATACTTTTA GCCTCCCAAT TGAACGCTAA AGGTGTTAAG GTAATTATAT TGGATTGGCA TGGGGAATAT GATCAACTCC TCAAAAACGG CTTTAGAATT TATGATGAGA AAACTATAGT AAAAATAAAT CCATTACACT TAATAGATTT AGACGTGGAA GATACAGTTG ACATTATTGG AGATGTTTTA CAACTAACAG ATCCACAACG ATTTTTACTT TATACCATTT TATTAAAACT AAAAAGTTAT AGAAAATTCT CAATTAATCA GTTATTAGAA GTTATTAATA GTATCGAAGA TACGTCGTAC TGGATGCGGG ACGTGAAATA TGCTTTGCTT AGAAAAATAT TTATCTTATT TACTCCAACT GCATCTAAAT TATTTTCTAC TGTAGATGAA ACTTCACTTA ATGACTTTCC AGATTATTTA ACGAGTTCTA CAATCATAAA CTTAGGATTT ATTTCAAATC TTAAACTCAG AAAATTATAC TCATTATTTC TAATAAAACT TATAGTGGAA AGTTATATAA GATATAAGAT AAACCAACAG ACCCTTATCA TTCTAGATGA AGCACAAAAT TACTTCAATA GGGAGGGAAA TGAATTTATA GATAGATTAG CCTCCGAGAT AAGAAAATAT AATATAGGTT TATGCTTTAT TACTCAGTCA CCATCATTAC TTTCGCAGAA TGTACTGAAA AATACAAATA TAAAAATTAT TCATTCAATA AAATCTGATG TCGATAAGAA AGCTATTAGA GATACGTTGT CACTCGATGA AAGACTTACA CAAAGTTTAG ATAAACTAGA CGTAGGAGAA GCAATAATAA GTGCACCAAA TTTAAAAATA CCTATAATAA TTAAAATTAA AAAAATATCT TAG
|
Protein sequence | MNKNLWIPIL LIILGIGFLF HNLININLMF FVFPIIMIVV ISFIFRNSLK VKINKFILKN GIFQIMYDNT CICGVAMKIT GKIEPTSNKN DIEKELKDFI NAIARKDSEF KFIIFTIVEK NKLGSSIIIY RILQHSTDIE LDSFMEEVNN LLVLAKAIAP HLEFKIIQPS KNVLPIPMAF GNYPFLTVSE ITYTNPINSN IVSEDFDVEI GEATNGTVTS RVGIRVKDIT RHIGIFGSTG SGKTNTAILL ASQLNAKGVK VIILDWHGEY DQLLKNGFRI YDEKTIVKIN PLHLIDLDVE DTVDIIGDVL QLTDPQRFLL YTILLKLKSY RKFSINQLLE VINSIEDTSY WMRDVKYALL RKIFILFTPT ASKLFSTVDE TSLNDFPDYL TSSTIINLGF ISNLKLRKLY SLFLIKLIVE SYIRYKINQQ TLIILDEAQN YFNREGNEFI DRLASEIRKY NIGLCFITQS PSLLSQNVLK NTNIKIIHSI KSDVDKKAIR DTLSLDERLT QSLDKLDVGE AIISAPNLKI PIIIKIKKIS
|
| |