Gene Ssol_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1228 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1144970 
End bp1145989 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content34% 
IMG OID 
ProductRNA methylase, NOL1/NOP2/sun family 
Protein accessionACX91466 
Protein GI261601863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC GCATAGCGAA GTATTTAAGT GCACATTACA ATTTGTTTCA AATTTCTCCT 
AGCTATAAGG CTAAAAGGTT AGCATCTAAG TACAGATTTT TAGATTATAT GATTGAGCGA
TATTTGAATA TGTTTAGTAC TGAAGAAGAA TTAGAAGAAT ATTTAAATTC TTGTAGCTTT
CCATTAAAAA AGAGCATTAG ATGTAATACA CTGAAAACTG ATTGCAAAAA ATTAGAAGAG
ATAATGTTAG AGAAAGGATT TGTTTTGGAA AAAGTTAAGT GGTTGCAGCA TGGCTATGTA
GTTAAAAGAA CTCCACCTAA GCCATCTTTA GGTTCTACAC TCGAGTATCT AATGGGATAT
TATCATATCC AAGGTCTAGC CTCTATGGTA CCTGCATACG TTCTAAATCC TTCATATGAT
GATTTTGTTT TGGATATGGC TGCAGCACCA GGCGGAAAAA CTACACAATT ATCTCAAATT
ATGCAGAATA AAGGTTTGGT GATAGCAGTT GAGAAGAAGC GTAGTAGGAT AAGAGCTCTT
CTCAGTAACG TTAATAGGCT AGGTGCTGAA AACGTGGTGC TAATTAAAAC TGATGCCTTA
AATTTAATAA ATATAAACAA ATCTCAATTT GATAAAATAT TATTAGATGC GCCTTGTAGT
GGTGAAGGAT TAATACAGAA GGACCCTACT AGACGATATA AAACCACAAT GGACGACTTA
AGGGATTTTG CGCACTTGCA GTTATCTCTA ATTGAGATCG CATATGAACT CTTGAAAAAG
GGAGGTTATA TTGTTTATTC CACATGTAGT GTAGCACCAG AAGAGGACGA ATTAATTGTT
AATTTCGCTA TCGAAGAATT AGGTATGAAG GCAATGAGTG TAGAAGGATA TCCTGCCTCT
AACGGATATA TAGAGTATTA TACTACTAGA TTTAGTAACG ATGTGAAGAA TTGTTTAAGA
TTTTTCCCAC ATAAGCAAGG CACGGAGGGG TTTTTCTTAT GCCTTTTAAA GAAGGAATAA
 
Protein sequence
MENRIAKYLS AHYNLFQISP SYKAKRLASK YRFLDYMIER YLNMFSTEEE LEEYLNSCSF 
PLKKSIRCNT LKTDCKKLEE IMLEKGFVLE KVKWLQHGYV VKRTPPKPSL GSTLEYLMGY
YHIQGLASMV PAYVLNPSYD DFVLDMAAAP GGKTTQLSQI MQNKGLVIAV EKKRSRIRAL
LSNVNRLGAE NVVLIKTDAL NLININKSQF DKILLDAPCS GEGLIQKDPT RRYKTTMDDL
RDFAHLQLSL IEIAYELLKK GGYIVYSTCS VAPEEDELIV NFAIEELGMK AMSVEGYPAS
NGYIEYYTTR FSNDVKNCLR FFPHKQGTEG FFLCLLKKE