Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1202 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1116654 |
End bp | 1117832 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | DNA-directed RNA polymerase, subunit A'' |
Protein accession | ACX91440 |
Protein GI | 261601837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.551072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATG AGAAAGATAA GCCCTATTTA GAGGAGAAAG TGAAGCAAGC TTCCAATATC CTCCCTCAAA AAATTGTAGA CGATTTGAAA AATTTGATAT TAAACAAGGA AATAATAGTG ACGAGAGATG AGATTGATAA AATCTTCGAT TTGGCTATTA AAGAGTATAG TGAAGGGTTA ATAGCTCCAG GAGAGGCTAT TGGAATTGTA GCCGCACAGT CAGTAGGTGA GCCCGGTACC CAAATGACAT TAAGGACTTT CCATTTTGCG GGTATAAGAG AGTTAAATGT AACTTTAGGA CTTCCAAGGC TAATAGAAAT TGTGGATGCG AAGAAAGTTC CATCTACTCC AATGATGACT ATTTATTTAA CTGATGAATA CAAGCGTGAT AGGGATAAAG CGTTAGAAGT CGCCAGAAAA TTAGAATATA CGAAAATAGA AAATGTAGTG AGTTCAACTA GTATCGATAT AGCCTCAATG TCCATTATTC TCCAACTCGA TAATGAAATG TTAAAAGATA AAGGCGTTAC TGTAGATGAT GTTAAAAAAG CTATAGGTAG ATTGAAATTA GGAGATTTTA TGATAGAAGA ATCTGAGGAT AGTACATTAA ACATAAATTT CGCTAATATA GATAGTATAG CTGCGCTATT TAAACTAAGG GATAAGATAC TTAATACCAA AATAAAGGGA ATAAAGGGTA TAAAACGTGC TATAGTCCAG AAAAAGGGCG ATGAGTATAT CATTTTAACC GATGGTTCAA ATTTATCTGG TGTTCTTAGT GTAAAAGGAG TTGACGTAGC TAAAGTAGAG ACTAATAATA TCCGTGAGAT TGAGGAAGTA TTTGGAATAG AAGCGGCAAG GGAAATTATA ATTAGGGAGA TTAGTAAAGT ATTAGCAGAA CAAGGATTGG ATGTTGATAT AAGGCATATA TTATTAATTG CGGACGTGAT GACGAGAACG GGTATTGTAA GGCAGATAGG TAGACATGGT GTAACTGGAG AGAAGAATAG TGTATTAGCA AGAGCTGCAT TTGAAGTTAC TGTAAAACAT CTTTTAGATG CTGCGGCTAG AGGAGATGTA GAAGAATTTA AAGGTGTAGT AGAAAACATT ATAATTGGTC ATCCAATTAA ACTAGGTACT GGAATGGTTG AATTAACAAT GAGGCCGATA TTAAGGTGA
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Protein sequence | MIDEKDKPYL EEKVKQASNI LPQKIVDDLK NLILNKEIIV TRDEIDKIFD LAIKEYSEGL IAPGEAIGIV AAQSVGEPGT QMTLRTFHFA GIRELNVTLG LPRLIEIVDA KKVPSTPMMT IYLTDEYKRD RDKALEVARK LEYTKIENVV SSTSIDIASM SIILQLDNEM LKDKGVTVDD VKKAIGRLKL GDFMIEESED STLNINFANI DSIAALFKLR DKILNTKIKG IKGIKRAIVQ KKGDEYIILT DGSNLSGVLS VKGVDVAKVE TNNIREIEEV FGIEAAREII IREISKVLAE QGLDVDIRHI LLIADVMTRT GIVRQIGRHG VTGEKNSVLA RAAFEVTVKH LLDAAARGDV EEFKGVVENI IIGHPIKLGT GMVELTMRPI LR
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