Gene Ssol_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1196 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1112874 
End bp1114181 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content37% 
IMG OID 
Producttranslation elongation factor EF-1, subunit alpha 
Protein accessionACX91434 
Protein GI261601831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA AGCCTCACCT TAATTTAATA GTAATAGGTC ATATCGATCA TGGTAAAAGC 
ACACTAGTGG GAAGACTACT AATGGATAGA GGTTTCATAG ATGAAAAAAC AGTGAAGGAA
GCAGAAGAAG CTGCTAAAAA ATTAGGTAAA GAATCTGAAA AGTTCGCATT TCTACTAGAT
AGACTAAAAG AAGAAAGAGA AAGAGGTGTA ACAATAAATC TAACATTCAT GAGATTTGAA
ACTAAAAAGT ACTTCTTTAC AATAATTGAT GCTCCCGGTC ATAGAGACTT CGTAAAGAAC
ATGATAACTG GTGCTAGCCA AGCAGATGCC GCAATTCTAG TGGTTTCAGC TAAGAAGGGT
GAATATGAAG CTGGAATGAG CGTAGAAGGA CAAACAAGAG AGCATATAAT TCTAGCCAAG
ACCATGGGTT TAGATCAATT AATAGTTGCA GTAAACAAAA TGGACTTAAC AGATCCACCA
TATGATGAAA AACGTTATAA GGAGATTGTT GACCAAGTCA GTAAATTTAT GAGAAGTTAT
GGATTTAATA CAAATAAGGT TAGATTTGTA CCAGTAGTTG CACCTGCAGG CGATAACATA
ACTCATAGAT CAGAAAATAT GAAATGGTAT AACGGTCCTA CCTTAGAAGA ATATTTAGAT
CAGTTAGAAT TACCACCAAA ACCAGTAGAT AAACCATTAA GAATTCCAAT TCAAGACGTC
TACTCAATCT CTGGAGTAGG TACTGTACCG GTAGGTAGAG TAGAAAGCGG AGTGTTAAAG
GTAGGTGATA AGATAGTATT CATGCCAGCA GGCAAAGTAG GTGAAGTTAG GTCAATAGAA
ACTCACCACA CTAAGATGGA TAAAGCGGAG CCAGGTGACA ATATTGGATT TAACGTTAGA
GGTGTTGAAA AGAAAGATAT AAAAAGAGGA GATGTTGTAG GTCATCCGAA TAATCCACCT
ACTGTTGCTG ATGAATTCAC TGCAAGAATA ATAGTAGTAT GGCATCCTAC GGCCTTGGCA
AATGGCTATA CACCAGTGAT TCACGTTCAT ACTGCGAGTG TGGCATGCAG AGTTTCAGAA
TTAGTATCAA AACTAGATCC AAGAACTGGT CAAGAAGCAG AAAAGAATCC ACAGTTCTTG
AAACAAGGAG ATGTAGCGAT AGTCAAATTC AAACCAATTA AGCCACTATG CGTAGAGAAG
TATAATGAGT TCCCACCACT AGGCAGATTC GCGATGAGGG ATATGGGTAA GACTGTTGGA
GTAGGAATAA TTGTTGATGT AAAACCAGCC AAAGTAGAAA TTAAATAA
 
Protein sequence
MSQKPHLNLI VIGHIDHGKS TLVGRLLMDR GFIDEKTVKE AEEAAKKLGK ESEKFAFLLD 
RLKEERERGV TINLTFMRFE TKKYFFTIID APGHRDFVKN MITGASQADA AILVVSAKKG
EYEAGMSVEG QTREHIILAK TMGLDQLIVA VNKMDLTDPP YDEKRYKEIV DQVSKFMRSY
GFNTNKVRFV PVVAPAGDNI THRSENMKWY NGPTLEEYLD QLELPPKPVD KPLRIPIQDV
YSISGVGTVP VGRVESGVLK VGDKIVFMPA GKVGEVRSIE THHTKMDKAE PGDNIGFNVR
GVEKKDIKRG DVVGHPNNPP TVADEFTARI IVVWHPTALA NGYTPVIHVH TASVACRVSE
LVSKLDPRTG QEAEKNPQFL KQGDVAIVKF KPIKPLCVEK YNEFPPLGRF AMRDMGKTVG
VGIIVDVKPA KVEIK