Gene Ssol_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0882 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp827890 
End bp829008 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content37% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionACX91127 
Protein GI261601524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TTAGGGTTAT CGAACTAGGG AGTAACATTT CCGCACCTTT AGTTGGTACC 
ATATTGGCTG ACTTAGGAGC TGAAGTAATT AAGGTTGAAC CACCACCTTA CGGTGATGAT
AGGAGGAGAG TTAAGCCTGA AATAAACGGA ATTAGTGTAT ATTTTGCGAG TACGAACAGA
GGTAAGAAGA GTGTGGTAAT TAACTTGAAG AGTGATGAGG GTTATGAGAT CTTCCAAAGG
CTAGTTAAAA CTGCAGATGT TATAGTTACT AACTATAGGC CTTCCGCATT AAAGAGGCTT
AAGGTTGACT ACGAGAGTGT CAAGAGGATT AATCCTAAAA TAATTTATTG TTCAATAACC
GGTTTCGGTA ATTTAACTGA AGAGGCTGAT AGACCAGCTT ACGATCCTAT CATACTGGCG
TTAAGTGGTT TAATGGACAT GACTGGTGAG GAAAATCCGG TGAAGTTTGC CACTTCAATT
TCAGATATTA CCACTGGGTT ACTTGCAACT GTGATGATAC TATGGGCTTT AAATAAAGGA
GGGCCAACAT TTATTGACGT CCCAATGATA TATACTCAAT TTTATTTAAC CTTAGAGGAC
GCTTATATGT ATTTAAATAC TGGGAAAGTT CCTAAAAGGA TGGGTTCTGC ACATAGATAC
CTAGTACCTT ATCAAGCGTT TAAGGTTGTT GATGGTTATA TATACGTTGC AGTATTCAAT
GATGAGCAAT ATCTAAAGCT TTGTAAGGCG TTAAATAGGG AGGACTTATG TAAATTTGAC
ACGTTACAGA AGAGGGTTGA AAATAGGGAT TATTTAATAA AAGAATTGGG GAAAATTTTT
GAGAAGAATA CTAGAGATTA TTGGGTAGAT TTATTAAGTA AGGCTGATGT ACCAGTTGCC
CCAGTATTAA GCCTAGAACA AGCGTTTAAA AAGTATGGTA ATAGGTTGGT TTATGAGATT
GAGGGCGTTA AGTATATTGA TTTCCCCATA AACATAACGT CAAATAAGAG TAAAGCACCT
AGACTTGGCG AGAATACTAA AGAGGTTTTA CTTGAGTTAG GGTATTCGGA AGGGGAGATA
AATAGACTTG CTGAAAAGGG GATAATAATG CTAATATGA
 
Protein sequence
MDKIRVIELG SNISAPLVGT ILADLGAEVI KVEPPPYGDD RRRVKPEING ISVYFASTNR 
GKKSVVINLK SDEGYEIFQR LVKTADVIVT NYRPSALKRL KVDYESVKRI NPKIIYCSIT
GFGNLTEEAD RPAYDPIILA LSGLMDMTGE ENPVKFATSI SDITTGLLAT VMILWALNKG
GPTFIDVPMI YTQFYLTLED AYMYLNTGKV PKRMGSAHRY LVPYQAFKVV DGYIYVAVFN
DEQYLKLCKA LNREDLCKFD TLQKRVENRD YLIKELGKIF EKNTRDYWVD LLSKADVPVA
PVLSLEQAFK KYGNRLVYEI EGVKYIDFPI NITSNKSKAP RLGENTKEVL LELGYSEGEI
NRLAEKGIIM LI