Gene Ssol_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0866 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp810668 
End bp812617 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content36% 
IMG OID 
Productraffinose synthase 
Protein accessionACX91112 
Protein GI261601509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTT GGATAGAAGA CGAGAATGGG AATAAATATC AGTGTGACAG TAACGGAAAT 
TGCGAGAATT TAGCAATAGT TAAGGTTAAT ACAAAAGAGT ATAACAATGA CGGTAAAATA
TACAGCATAG AGGGGAAGTC ATTTGTCAAA CTATCTAAAT TTCCCATTAC ATTAAAGCTT
AACCTGAAGG CTGATCAGAT TCTCTCACTA ACTACTCAGC AAATTTACTC TGAAGTATAT
GGGAAAGCCT TTACGTATTA TAATCAATTG GCAATAGACA TGGAACCCGT CACTGAACCT
CCTAAAGAGT TAAAGTATGA TATTAAAAGC CTTGACCATG AAAAGTACAT AAGGACATAT
CCGTGCTGGC TTTATCCCGT CTTTAACAAT ATTCCAGATT ACACTGTTTT TGCGTTAGTT
AAGAGTGGAA ATTCCTATGA AGCGTTCTTC ACACTTTCTA ACAATTACGT TACGGCATAT
CTTTTTGGAG ACTCAGTTAG ACTCTACACT GGTTTTAATA CTGACGAAAT TAAGAGGAGT
TATTTCCTCT CTATTGGTAC TTCAGATAAT CCGTATAAGG CGATAGAGAA TGCAATAAAT
ATTGCGTCAA AAGAAACTTT TACTTTCAAA TTGAGAAAGG AAAAGGGATT TCCGGACAAA
GTAATGAATG GGCTAGGATG GTGTAGTTGG AATGCGTTTT TAACTAAAGA TCTCAATGAG
GAGAATTTGA TTAAAGTTGT AAAGGGGATA ATCGAAAGGG GACTGAGGTT AAATTGGGTA
ATAATAGATG ATGGTTGGCA AGACCAAAAT AACGATAGGG CGATAAGGAG TTTAAATCCT
GACAACAAGA AATTCCCAAA TGGATTTAAA AATACTGTAA GAGCAATAAA GTCTTTAGGT
GTTAAATATG TTGGTCTATG GCACGCCATA AATGCGCATT GGGGAGGGAT GTCTCAAGAG
TTAATGAAAT CACTCAACGT TAATGGATAT TTCACCAATT TCCTCAATAG TTACGTACCA
TCTCCAAATC TTGAGGATGC AATAGGTTTT TACAAAGCCT TTGATGGAAA TATCTTAAGG
GACTTCGATC TCGTTAAGGT TGATAATCAA TGGGTAATTC ACGCAATATA TGATAGCTTC
CCAATAGGTC TAGCTAGTAG GAATATTCAA ATTGCTTTGC AATATTCAGT AGGGAAGGAC
GTTATAAACT GCATGTCAAT GAATCCTGAA AATTATTGTA ACTATTTTTA TAGTAATGTG
ATGAGGAATT CTATAGACTA CGTACCCTTC TGGAAGGATG GGACAAAACT TCACATTATG
TTTAATGCTT ATAATTCCTT GTTAACATCT CATATAGTTT ATCCAGATTA CGATATGTTC
ATGTCTTATG ATCCCTACGC AAAGGTTCAT CTAGTTGCAA GAGTTTTCAG CGGAGGGCCA
ATTTATATAA CGGATAGACA TCCAGAGAGG ACAAACATCG AACTGCTGAG AATGGCAGTC
CTCCCAAATG GTGAAGTTAT TAGAGTAGAT GAGCCGGCTT TAATAACTGA GGATTTATTG
TTTAAAGACC CATTAAGGGA AAGGGTTTTA TTGAAGCTCA AGGGTAAGGT AAAGGGGTAT
AACGCCATTG CTTTCTTTAA CTTAAATAGT GGTGAGGTAG AGGAAGAGTA TAATAATAAC
GAGGACTATT ACTACTACAA AGTATTCTCT GGGGAATTCG GAGTAGGTAA ATTTAATGTT
AAGCTAAGAG AGCTTGACGC CGAGGTTGTT ATTACTTTTC CGAAGAGTAA CAGAGTAATA
GGTTTAAGAG AGTATATTTT ACCACCATTT ACTGTAATAG TCAGTGATAA CGTAGTAATT
CCTAAGGCAG ATGGCACATT ACTATATGTC AAAGACACTG AACTAAACGA AGTTAAGGCG
AGGGAAGGAA TCCCAGTTAC TATAGAATGA
 
Protein sequence
MMIWIEDENG NKYQCDSNGN CENLAIVKVN TKEYNNDGKI YSIEGKSFVK LSKFPITLKL 
NLKADQILSL TTQQIYSEVY GKAFTYYNQL AIDMEPVTEP PKELKYDIKS LDHEKYIRTY
PCWLYPVFNN IPDYTVFALV KSGNSYEAFF TLSNNYVTAY LFGDSVRLYT GFNTDEIKRS
YFLSIGTSDN PYKAIENAIN IASKETFTFK LRKEKGFPDK VMNGLGWCSW NAFLTKDLNE
ENLIKVVKGI IERGLRLNWV IIDDGWQDQN NDRAIRSLNP DNKKFPNGFK NTVRAIKSLG
VKYVGLWHAI NAHWGGMSQE LMKSLNVNGY FTNFLNSYVP SPNLEDAIGF YKAFDGNILR
DFDLVKVDNQ WVIHAIYDSF PIGLASRNIQ IALQYSVGKD VINCMSMNPE NYCNYFYSNV
MRNSIDYVPF WKDGTKLHIM FNAYNSLLTS HIVYPDYDMF MSYDPYAKVH LVARVFSGGP
IYITDRHPER TNIELLRMAV LPNGEVIRVD EPALITEDLL FKDPLRERVL LKLKGKVKGY
NAIAFFNLNS GEVEEEYNNN EDYYYYKVFS GEFGVGKFNV KLRELDAEVV ITFPKSNRVI
GLREYILPPF TVIVSDNVVI PKADGTLLYV KDTELNEVKA REGIPVTIE