Gene Ssol_0796 details

Gene Information

• Locus tag: Ssol_0796
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 739913
• End bp: 742081
• Gene Length: 2169 bp
• Protein Length: 722 aa
• Translation table: 11
• GC content: 38%
• Product: extracellular solute-binding protein family 5
• Protein accession: ACX91050
• Protein GI: 261601447

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.963873
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAA AGATAAAAAA TGTAATAGGG CTTACTGCAT TAATATTAAT GGCACTTTCA 
GCCTTTATGC CATTTATTAT CAGTAGCAGA GTAGTCAATT CACAATCACC TCAATTAAAT 
CCGGCAGCAA GCTATAGTTT TCCATGGGCA TCGTCATATC CAACTTTTGG AGTAACAACC 
GGAAGTGGAC CTATTGTACC TAATAATTGG AACGTGTTTG GAGTAGGAGA GAGATCCGAT 
GATATTCCTT ATGAGTTTAT ATTCGAGACA TTAGGAATTG CAGATTTCAT GACAGGTCAG 
GTTTATCCAT GGTTGGCGAC AAACTGGACA TTCACAGATA ATAATACAAA TTTCATTGTA 
TATCTAAGAC ATGGAGTTTA TTTCTACTAT AATGGAACAT TACCTAATGG TACGCAAGGA 
CAAATATTAT GGCCATTTTC AGCTAAGGAT GTGGTTGCAA CTTATCAAGA CTATTTTAAG 
GTCTATGGAA ATCCATTTAA TGTTACAGTA ACCGAAGTTA ATCCATACGA GGTTATTTTC 
CATTTTGGTA AACCAAACGT CCAGTACGCG TTGTATGACT TATTAGAGCA ATTTATTGTC 
CCTTGGGAAC AATACGCTAA TTTAACGAAT CCAGCTGCAG CAGTAATACC AATACCTGTG 
GGAACAGGTC CATATTATTT AGCTAAGGCC ACAGAAACCC AAGCTACATT CTATAGAAAT 
CCATACTACT GGATCCCAGG TAGGCCATTT ATATCAACGT TCACATACTA TGTTGGGATT 
AGTAATGCTC AAGCATATGG CCTTCTAGCT AAAGGAACCG CGCAGTGGGG TGGAACTGGA 
AGTACTGGAT CAACTCCTTT CAGTAAGTTA TTTACATATG CTAATCCTCA ATATTATCAT 
GGTATGGCAA GTATAGGGAA TGGATCTGGA GGTCAACCCT CGTTCTTGTG GATAAACTTT 
GCTAGGCTTA ACTATTGGCC TTGGAACGAG ACCTGGTTTA GATACGCGTT GTCATTAGCC 
TTAAATAGAA CACAAATTTC TTTAGGTTCG CAATATGGGA TACCTACCGG AGCTCCTCCA 
ACACCTGCTG ACTTCTTACC ATCTCCAATG GAAGAAATCT GGTTAAATTC AACAATTATA 
CAGGAAGCCC ATCAAGTAGA TCAGTATAAT CTCACTGAAG CTATACAGAT TTTGGAATCG 
CACGGTCTAA AAATAATTAA TGGAAAATTA AGTTTCCCTA ATGGTACACC ACTACCAACT 
TATACAATGA TAAATTATCA AGGTTTCTCT GATACCTATG CCACTACTCA ACTAATTGCA 
GAGGATCTAG CACAGATAGG ACTACAGATT AATGTTGTGT CAGAAACTCC TTCACAAATG 
TTCGGCCCGG CTCTTGATGG GGGTCAGTAT GATTTAATAT ACTGGATCAC TAATGCTTAC 
AGTCCTTATT ATGTGTGGGA ATCTGCGTTC ATACCTCCAC TTATACCTGG TACTGATCAG 
CCAAACGTAA CTGCTCTAGA AACTATTGGG GTATATGTAT ATTCTGATTT TGGTAGATGG 
ATCCCTCCTA AGGAATTTAT AGACCTTTGG ATACAGGCTG GAGATACAAC AAATGTAACA 
TTACTAAAAC AGATATATAA TAATATGGCA GCTATTCTAA TAAAGGATTT ACCCGCAATC 
CCAGTGGTCT TTGACGCATA TCCAAGATAC GAATATGAGG ACCAATACTA TATTGGATTT 
TCGACTCCAC AATACTTCTA TACATGGAAT GTGGAACCTT GGATAGGAGG AAATCTATTA 
ATGTTAATGA ATCTTGCTCC TAGACCTCCT GGTATGTCTA ACGCACAAGA GGTTGCTTAT 
ACTCAAGCTG CTTGGCAAGA TTTACTTGCA TTCATATACG GCAAGGCCAA TACTGCAACA 
CCACCATCAT TATTAGCTAT GTTGCAGCCT TCCACATCAA CAGTAACTCA GACTTCCACA 
AGTACTTCAA CTGTTACTAC AACGAGTGCG TCAACATCTG TCACTACTAC AACCTCTATG 
AGTACTACTT CGGTAACTAG TACTGTGTCA ACATCTAGTG GGTTATCTAC TGGTGTTATT 
GCTGGTATAA TTGTTGTTAT AATTGTAATT ATAGCAGTAG TAGCTTATGT AGTGGTAAGA 
AGAAGATAA 

 

Protein sequence

MNKKIKNVIG LTALILMALS AFMPFIISSR VVNSQSPQLN PAASYSFPWA SSYPTFGVTT 
GSGPIVPNNW NVFGVGERSD DIPYEFIFET LGIADFMTGQ VYPWLATNWT FTDNNTNFIV 
YLRHGVYFYY NGTLPNGTQG QILWPFSAKD VVATYQDYFK VYGNPFNVTV TEVNPYEVIF 
HFGKPNVQYA LYDLLEQFIV PWEQYANLTN PAAAVIPIPV GTGPYYLAKA TETQATFYRN 
PYYWIPGRPF ISTFTYYVGI SNAQAYGLLA KGTAQWGGTG STGSTPFSKL FTYANPQYYH 
GMASIGNGSG GQPSFLWINF ARLNYWPWNE TWFRYALSLA LNRTQISLGS QYGIPTGAPP 
TPADFLPSPM EEIWLNSTII QEAHQVDQYN LTEAIQILES HGLKIINGKL SFPNGTPLPT 
YTMINYQGFS DTYATTQLIA EDLAQIGLQI NVVSETPSQM FGPALDGGQY DLIYWITNAY 
SPYYVWESAF IPPLIPGTDQ PNVTALETIG VYVYSDFGRW IPPKEFIDLW IQAGDTTNVT 
LLKQIYNNMA AILIKDLPAI PVVFDAYPRY EYEDQYYIGF STPQYFYTWN VEPWIGGNLL 
MLMNLAPRPP GMSNAQEVAY TQAAWQDLLA FIYGKANTAT PPSLLAMLQP STSTVTQTST 
STSTVTTTSA STSVTTTTSM STTSVTSTVS TSSGLSTGVI AGIIVVIIVI IAVVAYVVVR 
RR