Gene Ssol_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0613 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp561836 
End bp562660 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content35% 
IMG OID 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionACX90887 
Protein GI261601284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.326726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGATG TCATTAAGCA GGCTGAAGAA CTATTGGAAA AAGGTAGGTA TAACGAGGTT 
TTGAAAGTCT TAGAGAACTT TGAAAGTGTA GAAGTATACT TGCTTAGAGC TGAAGCCTAT
TTAAGAATGA ACAATTCAAA AGCGGCTTTA GTAGAATTAG ATAAGGGTGT TCAAACTTTT
CCTTTCAGTT ATGCAATATT GTCAGCTAAG GCTGAGGTTT TGGAGAATGA AGGAAGATTA
GAAGAGGCAT TAGAAAACAT AAATAAGGCG TTGGAAATTT TGCCCTTTTC CTCAGAATAT
CGATTCATAA AGGCTAGGAT ATTGTTTAAG TTGGAAAGGT ATGAAGAAGC TAATATAGAG
TTAACTGAAG TCTTAAGACT AAATCCAAAT AATGTTGACG CTAGGGTCAT GAAAGCGTTT
TGCTACTACA ATATGGGATT AAAGTTAGAC GCCTTATCAG AAATTAATCG TGCATTAAAT
GTTAAGAAAG AGGATTCATC CCTTCACGAG CTAAAGGGTA AAATATACTT TGAGACTGGA
TTTTATAAAC TAGCCTTAAG CGAATTTAAG ATAGCTGCCC ATTACGATCC TAATAATCCA
GATCATTATT ACAATGCTGC AGCTTGCTAC TACAACTTGA AAATGTATAA CGACGCTTTA
ACATACATGG ATTTAGCCTT ATCAAAGGGT GAGAAAGCTA ATTACCATAT ACTAAAGGCA
CTAATACTTA AAGAACTTAA CATGGAGTTC TCCCAAGAAG TAGAGGAGGC CATTAAGTTA
GATCCATCCA CTAAATCAAT TATAGAAAAT CTTTTCAAGA AATAG
 
Protein sequence
MEDVIKQAEE LLEKGRYNEV LKVLENFESV EVYLLRAEAY LRMNNSKAAL VELDKGVQTF 
PFSYAILSAK AEVLENEGRL EEALENINKA LEILPFSSEY RFIKARILFK LERYEEANIE
LTEVLRLNPN NVDARVMKAF CYYNMGLKLD ALSEINRALN VKKEDSSLHE LKGKIYFETG
FYKLALSEFK IAAHYDPNNP DHYYNAAACY YNLKMYNDAL TYMDLALSKG EKANYHILKA
LILKELNMEF SQEVEEAIKL DPSTKSIIEN LFKK