Gene Ssol_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0612 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp557475 
End bp561755 
Gene Length4281 bp 
Protein Length1426 aa 
Translation table11 
GC content39% 
IMG OID 
Productconserved hypothetical protein 
Protein accessionACX90886 
Protein GI261601283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGT TAAGTAGAAG GGACTTTCTT AAAATATCTG GTGCAACTGC TGTAGCAACT 
GCGTTTATTT TAGGAGGAAA TAGTGTAGCG AAGAGGATAT TTGATAGTGT TTCTGAGACG
AATTACACTC TTAATTATCC TAGCGACGAA ATAGTATACA CTAATTGTTT CCAATGCTTA
GGCAGATGTG CAATAGAAGT AGTTAGAACT CCTACCGGTT TCCCCAGGTT TGTGACTGGA
ACTATCGGAT GGCATATAAA TGATGGAGGA GTTTGCCCTA GAGGTGCGGC TGATGTCTTC
TATTATTTTG CACCATCTAG ACTTAGGTAT CCCTTACTGA GAGCAAGTGA TAGGGGTTCT
GGAAAGTGGA TTGCTGTAGA CTACGATACT GCATTTGACA TTATAGTAAA TGGTACATCT
GCACAAAGTT GGAGTAAGTT AGGATTAAAT CCCCAACAAT TAGGTATTGG AAACTTCCCT
GGATTGCTTA AAATTAGAGA GACTAATCCT CATGCTTTAG CCTTTTGGGA AGGAAGGGAT
CAATTAATAC CTGGTATAAC AGGTGGGTAT TTCTCAGCAA ACTTCGGTAC AGCAAATGCA
GCAGCCCACG GTGGTTTCTG TTCAATGAAT GTATATACAG CAGGAGTTTA CGTTACAGGT
GCACCAGTGT GGGAGTATGC AGGACCAGAT GAGGAAAGAT CACAATACTT TATTTTAGCT
GGGCTAGCTG GAGACCACTT CCCCAATTGG ATGAGAAGGA TAATTGCTAG AATAAGGGAG
AATGGTGGAA AGGTACTAAC GATAGCCCCG GAGAGGTATG GATTTTATTC AGTTTCTGAT
GAACATCTAT TCGTTAACCC AGCAACAGAT GGAGCACTAG TAATGGGTTG GATCAGAGTA
CTAGTTGACT TCCACTACTA CATATATAAG GTTTCTCAAG GACAAAAAGT ACTTAACCCA
ATAACGTTAC AGCCAGTCCA ACTTGCAGTT AATCCAGCAT CTGGTCAATT ATGGATGCAA
ACAATAACCC CATCTGGTCA AGTAGTAGCT CTATCAAGTT TAGGTGATAT TCCTTCCACG
GCAGTATATG CTCATATAGA TGAGGAATTC TTAAGGTATT ACACTAACTT ATCGTGGTTA
GTAATTGTAA ACCCAAATCC ACAAAACGGT GATTGTCTTG ATCCAACAGA TCCTACTGCT
GGGAATAACG TAGGTCTTCA CGTAAGGATG TCCGTAAGTA ATCCTCAATA TAGTAGTAAT
CATCCTTGGC TAGAAGCAGT AATGGGCAAT GATGGTAATG TCTATGCATA CGTTGATATT
CCATGGCAGA AGAGTGTAAT ACCAATTCTT ACTTTAGACG AATTGCCCCA GAGTATGCAA
TCACAGATAG TTCAAGTACC TTATAAACTA AAGAACGGAA CTGTAGTAAA AATACCAGCT
ATCCAAGTTA CAGTTCCTAA AGCGTTAGGT TCTCAAGATA TGATTACCTT GACAGCAACA
ACTGCATTTG AATTATTTAG AGCTGAGTTA TTGAACTATG ATCCTTACAC ACCTTTATCA
CAGTCCCCAC AATATGGAGC ACTGAACGTT GCATCAGTTA CCGGAATTCC ACATCAAACT
GTAGTGAGGA TTGCTAATGA GATTGCTAAT GTAGCTTTCC AAAAGGCAAT ATACGAACCA
GCTAAGTGGG TAGATTATTT AGGTAGATTC CACGACCACG TGGTAGGTAG GCCAGTTTCC
ATTTACTTCA TGAGAGGTTT AGCTGCCCAT GCAAATGGTT TTATGAGTGC CGCATCGCTC
TATTATCTAG TATTAATGGT AGGTGCGTGG GACAACCCAG GTGCTGATCT GTACAAATAT
CCTTATCCGC ACTACCTCCC CGGTCACGCA GTACCACCAC ATCCATTAGC TAATGCTCCG
CAAATAGATC CAGATGTAGC AAACGCAATA CAAGGGCTAA ATCTAACGAT ACCCAAAAGT
AGGAGTGGGT TCTTAAAAAC TGAATACATA TACAATGATG GAACAGTATA TGTAAAGAAT
GTACAAGTTG TAGGCGCTGG ACCCTATGGG TTCCCCGATG GCCCAGATGA TTTAGTAATA
TATAAAACTG GAAGGCCATT ATTAGTAGAC AGAGGTTATT CTTGGGAACT ACCACTAACA
ACGCAGAGGT CGATTTCAGC TGTAGCGGCT ACCTCATATC TTATGAACAA GTATCCAAAG
CAAGTTATAC CATACACAAT AAATGCCATG ATGTGGTACA TAACATCACC ATTCTGGAAT
AACGCATATA ACCTTGCAGA AGTACTTCAA ATGGTAACTG AAAAAGATAG CAGTGGGAAT
TACATTATTC CATTTACAAT CTCATTCGAC TTATTCATGC ATGAAACTAA TAATGTAGTT
GATCTAATTA TGCCAGATTT ATCATTCCTT GAAGTATACG GTTTCCACAG TACCTTTGAT
AGACCAACTT CATTACCTCA AGGTCCTTCT GATTCATTGA ACTGGCCTGC ATTACCCTCA
TTATATCCAG TATTAAGTAC TGGCGATACT CTATTAACAT TACTATGGAT ATTGAGAGCA
TATCCAAGTC AAAATACAAT TGACCCCATG AAGAACCCAT TCTATACTAC TCAAGATCCT
ATAACTGGTG GAGACTTGAT TAGCCCTATA ACGTTACATG ATCCACTCAC TGGAACTGCA
ATTCTACAAC AAGGTCAGCC TGGATTAATA TCCACTGGAA TGTTTATATT AAAACAAGGA
ATATTGTTGG CAGGTTATGG TGATAGATTC CAGTACATTT TGACAGATGC TAATGGTAAA
CAATCGCCTA ATCCTCAACA ATTAAAGCTT TATGCATCAT CCGTACCAAA CAATTCAACA
CAAGATGCGG TAATAAATCA GATACTAAGT AGTGTACCCA GTGGGCAAAA ATTCTCTACT
GCTCCAACTT ACAAGAATAG TGCTAGCAAT AGATCAAGTG GAGTAGAACA TTACTTTAGG
ATTTCAGTAG AGTTTCAACC TAAGTTGCAA TCAATGTTAC AGACCATAAT CAATAAATAC
GCTGCGGGAA AAATGACACT AGACGATATC AACCCTGGTT ATGTTAAAGT AGGAAAAGGA
GGAGCAGTGT ATGTACTACC ACCTTCAATA AGATACATGA GAAATGTTAA TATGTTCTAC
TTCCTTGGAT GGGGAGCTTA CATGCCTGGA GCCTATGGCC CAATAGGTTT ACCATACGTA
CATAGAATAT ACTTAGAATA TCTACAGAAG TTTAGATTAG CAGCTGCTGG AAAATGGACT
GGTTATAACG CTGCCTACTA CTATTACTAT TTAAAAACTA AGAACACTAG CTTCCTAGTA
AGATCACAGC TTCCGAATGA TAGTTATGGT AAAGCTCTAC AGAAGAATAT TCTAGATTAC
TTCAGACCAT TTGGTGGTTA TTATCCTGTA CCAGCATGGC AGTCAGATAT AACTTCTGAT
GGAATAAATT TAAGTCAGTA TCCGTTAACC TTCTTCGTTA GAAGACATGA TAGAATGTAC
CATTCGTGGT CTTACGTAGT ACCATGGTTA ACTGCAATAA TGCCATACAC ACCAGTAATG
CTGAGTGCAG CAGATCCATA CGTTAAGAGC ATGGGAATCC AAAGTGGTGA TATGGTACAA
TTTGAAGCAG TTAACCAACC GTCTAGTGGA GGACAAAGAA CTACTATTAC CGCAATTGCC
TTCTTAGATA ACGCAACAAG GCCAGGTACG GCATGGGTGA TTGTATCGTC GCAAGCCTTA
CCAGGCTTTA GAAGTCAAGC AACTAATTCA CCACAAGTTA AATATAGCAT ACTTAACAAT
TGGGCTAATA TCTCTTATAT GCCTCCATCC AGAGGTGGAA TATTAGATCC TATGAAAGAT
AATGCGTTCC CAATATTGTA TCTCGATCCA ATTACTGGAC AAACCTCATG GCATGATAGT
AGAATAAGAA TTGTGGGTAA AAGTACATCA ACACAAGTCC AAGTAGTCTC CAATAAGTTC
ACTTACATGG GTCAGGACTT TTCAAACCAA GATATACTTA GCGTAATAGT AAGCAAAATG
GGAGGTCAAA TAACAGTAAA TAATACGCCA TCACAACCAA CATTTGCACA ACCGATCGAT
ATTCCACATC TGAGATTCGA CGCTAATAAC ATTACGTCAA CTAGCCTATG GAGTTATGTT
GCACCTGGTT CGTTAGCCCC AACTTATACT ATAGGGCAAT ATAAGATAAG GTATGGGTTC
GCAACAGAAC CCTCCTCTTA A
 
Protein sequence
MLKLSRRDFL KISGATAVAT AFILGGNSVA KRIFDSVSET NYTLNYPSDE IVYTNCFQCL 
GRCAIEVVRT PTGFPRFVTG TIGWHINDGG VCPRGAADVF YYFAPSRLRY PLLRASDRGS
GKWIAVDYDT AFDIIVNGTS AQSWSKLGLN PQQLGIGNFP GLLKIRETNP HALAFWEGRD
QLIPGITGGY FSANFGTANA AAHGGFCSMN VYTAGVYVTG APVWEYAGPD EERSQYFILA
GLAGDHFPNW MRRIIARIRE NGGKVLTIAP ERYGFYSVSD EHLFVNPATD GALVMGWIRV
LVDFHYYIYK VSQGQKVLNP ITLQPVQLAV NPASGQLWMQ TITPSGQVVA LSSLGDIPST
AVYAHIDEEF LRYYTNLSWL VIVNPNPQNG DCLDPTDPTA GNNVGLHVRM SVSNPQYSSN
HPWLEAVMGN DGNVYAYVDI PWQKSVIPIL TLDELPQSMQ SQIVQVPYKL KNGTVVKIPA
IQVTVPKALG SQDMITLTAT TAFELFRAEL LNYDPYTPLS QSPQYGALNV ASVTGIPHQT
VVRIANEIAN VAFQKAIYEP AKWVDYLGRF HDHVVGRPVS IYFMRGLAAH ANGFMSAASL
YYLVLMVGAW DNPGADLYKY PYPHYLPGHA VPPHPLANAP QIDPDVANAI QGLNLTIPKS
RSGFLKTEYI YNDGTVYVKN VQVVGAGPYG FPDGPDDLVI YKTGRPLLVD RGYSWELPLT
TQRSISAVAA TSYLMNKYPK QVIPYTINAM MWYITSPFWN NAYNLAEVLQ MVTEKDSSGN
YIIPFTISFD LFMHETNNVV DLIMPDLSFL EVYGFHSTFD RPTSLPQGPS DSLNWPALPS
LYPVLSTGDT LLTLLWILRA YPSQNTIDPM KNPFYTTQDP ITGGDLISPI TLHDPLTGTA
ILQQGQPGLI STGMFILKQG ILLAGYGDRF QYILTDANGK QSPNPQQLKL YASSVPNNST
QDAVINQILS SVPSGQKFST APTYKNSASN RSSGVEHYFR ISVEFQPKLQ SMLQTIINKY
AAGKMTLDDI NPGYVKVGKG GAVYVLPPSI RYMRNVNMFY FLGWGAYMPG AYGPIGLPYV
HRIYLEYLQK FRLAAAGKWT GYNAAYYYYY LKTKNTSFLV RSQLPNDSYG KALQKNILDY
FRPFGGYYPV PAWQSDITSD GINLSQYPLT FFVRRHDRMY HSWSYVVPWL TAIMPYTPVM
LSAADPYVKS MGIQSGDMVQ FEAVNQPSSG GQRTTITAIA FLDNATRPGT AWVIVSSQAL
PGFRSQATNS PQVKYSILNN WANISYMPPS RGGILDPMKD NAFPILYLDP ITGQTSWHDS
RIRIVGKSTS TQVQVVSNKF TYMGQDFSNQ DILSVIVSKM GGQITVNNTP SQPTFAQPID
IPHLRFDANN ITSTSLWSYV APGSLAPTYT IGQYKIRYGF ATEPSS