Gene Ssol_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0590 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp538096 
End bp539319 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content37% 
IMG OID 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain protein 
Protein accessionACX90866 
Protein GI261601263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00186747 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTTCG ACGCTGATGT TATAATAGTA GGTGGAGGAC TAGCTGGGCT TTCCGCTGCT 
ATTACTGCAA ACAGAGAGGG ATTATCAACT ATTGTATTAG AAAGAGGAGA ATATTCTGGA
AGTAAGAACG TTTCTGGAGG AAGAATGTAC ACTCATGCAT TATTACAATT ATTTCCCGAT
GCACTGGAGA GAGCACCATT AGAGAGACCG GTAACTAATG AAACTTACGA GATCTATTGT
GAAGAAGAAA AAAAGATTAC TTTTTCGTTC CGGCATAAAA CTAGAAATAG CTATACTGTA
TTGAGGGCTA AATTTGACCA ATGGCTAGCT AAAGAGGCTG AAAATGAGGG AGTTTTAATA
TCTTATTCAA CACTGGTTAC TAATGCTAGG CGGGAAAACG ATTATGTGGT AATAGAGACT
AATAGAGGTG AACTTAAGGC ACCTTTAGTT ATAGATGCTG GTGGAATTAC AGCTCCAGTC
TCCAGATTCT TAGGAGTTAA AAAATTAGAG CCCAAGACGT TAATGTTAGG AGTTAAAGAG
GTATTAGACA TTAAACCCGA TATGGATGAT GATGAGGGTG AGGCTAGAAC CATAGTGGGA
TTGATAGGAA ATTTGAAAGG AGGAGGTTTC GTTTACACTA ATAAAGATAC ATTATCCGTA
GGCGTTACGA TAAAAGTTGA GTCGTTATAT AATTCTAATA TACCTTCGCA TGAAATTGTA
GAGAGATTTA GAGAGTCGTT GGGCTTAAGC GGGAGTATCC TAGAATACTC TGCACACTTG
ATTCCATATT ACGGTTATGA TAAGATAGGT AAAATCTACG ATAAGAATTT AATTTTAGTA
GGCGATGCAG CTGGATTTCT AATAAACGAC GGATTCAACA TTAGAGGAAT GGATTTAGCA
ATGGGCTCTG GAATTATTGC TGGAAAGTCA GCTAAGAAGA TTAAGGAGCT TAACGATTAT
AGTAGAACTG ATATCTATTA CGAGATGCTC AAAGAATCTT TCGTACTAAA GGATATGAAG
ACCGCCTTAA GGTCTTTTAG CGTATTAAAT GAGGAGGAGA TTTTCACTAA ATATCCTAAG
GTCATTTGTA ATGTGCTGGG CCAATTGTTT ACAGTAACAA GTGATGGAAA GGAGAGGCCT
ATAAACGTCT TAATTAAAGA AAGTAAAAGC GAAAACGTAA ATACTACGAA AATGCTAACT
GATATCATGA GGTTATTTAT ATGA
 
Protein sequence
MSFDADVIIV GGGLAGLSAA ITANREGLST IVLERGEYSG SKNVSGGRMY THALLQLFPD 
ALERAPLERP VTNETYEIYC EEEKKITFSF RHKTRNSYTV LRAKFDQWLA KEAENEGVLI
SYSTLVTNAR RENDYVVIET NRGELKAPLV IDAGGITAPV SRFLGVKKLE PKTLMLGVKE
VLDIKPDMDD DEGEARTIVG LIGNLKGGGF VYTNKDTLSV GVTIKVESLY NSNIPSHEIV
ERFRESLGLS GSILEYSAHL IPYYGYDKIG KIYDKNLILV GDAAGFLIND GFNIRGMDLA
MGSGIIAGKS AKKIKELNDY SRTDIYYEML KESFVLKDMK TALRSFSVLN EEEIFTKYPK
VICNVLGQLF TVTSDGKERP INVLIKESKS ENVNTTKMLT DIMRLFI