Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0528 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 472526 |
End bp | 473935 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | ACX90807 |
Protein GI | 261601204 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.402464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACTA ACTCTATCCT GATTGTATTA ACTCTAGGAT CTCTAATGGC TGCAGTGGAT ACTACAATAG TATTATTAGC ACTTCCTACT ATTACATCGA GCTTACATAC CGACTTATTG TCGTCAATAT GGGTGCTTTT AGCTTACATG ATAGTTATTT CAGTTTTATC AACACAAGCT GGCAGAATAG GGGATTTATT TGGAAAAGGA AAGATCTATA ATTTAGGATT TGTAATATTT ACAGCAGCGT CAGCCTTATG TGGTATTTCA AGTAATATAG ATATGCTGAT TGTATTTAGA ATTATACAAG CTATTGGTGG GTCAATGTTG GTGGCTAACA GTTCATCCAT AGTGGCTGAT GTTTTTCCAC CTAATAGAAG AGGTAAGGCT TATGGAATAA CTAGTTTAGG TTGGAACATA GGGGCGTTAG TGGGTATTGT TTTAGGTGGA GTTTTGACTA CTTTCTTTGG CTGGCAATAC ATATTTTACA TTAATGTACC GATTGGAATA GTCGCAGTCC TTTTAGGAGT AATGAACATT AAGGATATCA ATAAGGTTAA TACGAAACTG GATATGCTTG GAGCAATCCT TTTGGGCATT TCATTAGCAT TAATATCGTT ATCATTAATG TTTATTGCGG CATCTGGAAT TTCTACTGAT AATATTATAG AGTTAGCTTT AGGTGTAGCG TTAATACCAT TTTTCCTATT AAATGAAACT AGGAGTAAAT ATCCTATATT AAATTTGAAA ATATTTAAAA TAAGGCTTTT AACGTATTCA ATCTTAGCTA ATTTCCTCCA AGGGATTGGA GGGCTTTCCT TGAGTTTCTT ACTTATAATG TATCTTCAAG GCGTTAGAGG ACTTAGCCCT TTAGATAGTT CCTTATTATT GACACCAGGT TATGTTATTG CTAGCATTTT AGCTCCATTT ATGGGAAGAG TAGCGGATAG GGGAAAGCCG GGTATTGTAG CTGGTATAGG TTTGATGTTC ATTTTCATTA CCATGATTCT GTACTTCTTC TTACTAACAC CGACTACTGA CTATTATTTA ATTGTAGGAA TTAGTGCAAT TACTGGTATA GGCTCTGCGA TGTTTTGGCC GTCCAACTCA ACTGCTATAA TGTTTCATGC ACCTAAAGAA TATTACGGTT CGGTCTCGGG TTTATCCAGA ACGTTAGGGA ATATAGGTAC TATTCTAAGT TACGTTTTAA GTATAGTAGT TGCAACTTTA AGTATACCCA GAAGTGTTGC CTTTGAGATA TTCATAGGAA CTACCACGTT GAATGGGGAC GTCAGTGTAA CGTTTGTTAA TGGATTACAT TTTGCTTTTC TCATATCTTC GATTATAATA GTAGTAGCTA TGATATTCTC TTTTATGAGT GGGAAAACTC AAGAAAGTGC CATCAAATAG
|
Protein sequence | MNTNSILIVL TLGSLMAAVD TTIVLLALPT ITSSLHTDLL SSIWVLLAYM IVISVLSTQA GRIGDLFGKG KIYNLGFVIF TAASALCGIS SNIDMLIVFR IIQAIGGSML VANSSSIVAD VFPPNRRGKA YGITSLGWNI GALVGIVLGG VLTTFFGWQY IFYINVPIGI VAVLLGVMNI KDINKVNTKL DMLGAILLGI SLALISLSLM FIAASGISTD NIIELALGVA LIPFFLLNET RSKYPILNLK IFKIRLLTYS ILANFLQGIG GLSLSFLLIM YLQGVRGLSP LDSSLLLTPG YVIASILAPF MGRVADRGKP GIVAGIGLMF IFITMILYFF LLTPTTDYYL IVGISAITGI GSAMFWPSNS TAIMFHAPKE YYGSVSGLSR TLGNIGTILS YVLSIVVATL SIPRSVAFEI FIGTTTLNGD VSVTFVNGLH FAFLISSIII VVAMIFSFMS GKTQESAIK
|
| |