Gene Ssol_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0378 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp342049 
End bp343107 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content36% 
IMG OID 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionACX90663 
Protein GI261601060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0516728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGAATA TTATACTTAA GAATTACGAA GAAGAACTAT TTGACCATGA AGTTTACAGT 
AAGTTAGCAG AAGTAGAGAG AGATCCAGAG TTGAAGAAGA CACTCTTTAA GTTAGCAGAA
ATGGAGAAAA AACATTCGGA ATTTTGGAGA GAGATTGCAG AGAAGAGAGG ACTTAAAGTT
AAAGGAAAAT TATCCACATT AAATAAAATC AAGGTGGACT TTTACAGTTT GTTACGAAAA
ATTTTGGGTT TAGATATTAC TATTAAAGTC CTAGAGAGTA GTGAGGAAGA TGATATAGAG
AAGTATAGAA AATTGTCAGA AATGGAAATG TTCTCGTCTG AGGAGAAACA AAGGTTAAAG
GATATCATGG TAGACGAGGC AGTACACGAA AAAGTTTTAG GGAATGTTGA AGCCAAGAGC
GTAGGTGATT TTGTATATGG TATAAGTGAC GGTCTAGTAG AGGTTCTGGC TGCAGTGTCG
GGATTATCTG GGGCTATATC TTCACCGCTG TTTGTTGCCG TAGGAGGATT GATAGTAGGA
GTATCTGGAA CGCTTTCAAT GGCAATAGGT GCGTACCTAT CTACTAAGTC AGAAAAAGAT
GTAAAGATCC AAGAAAGAAA AAGATTAGAG TTAGAGAAGA ATGTTGATCA GCACTCAGTT
CAATTAAGGC TAGTTAATTT CTTCACAGAA CTTGGAGTAA ATCTAAATCT AGCTAAGAAG
GTTTCGTTAA GTTTAGTAAA CGTTGCTGAA GATATTCTAT ACCCGGAAGT TAAAGAAAAT
CCAGTTAAGA GCGCCTTGAT TACCGGTTTG TCATATATTA CTGGAGCCAT AATACCCATA
TTGCCATATT TAATTGGTCT ATCTGGGCTT ACTGGTCTGA TTACATCATA TATAGTTGCA
GGATTATCTA CGTTTATAGT GGGTTCTATT ATAGGAATAT TAAGTGGAAT AAGTCCATTT
AAGAAAGGTA TCCAAATGGC TTCTTTAGCA CTGCTAGCAG CTTTAGGTAC TCATGGTTTA
GGATATTTAG CGTCAAGGTT TCTAAATGTT AGCATCTGA
 
Protein sequence
MENIILKNYE EELFDHEVYS KLAEVERDPE LKKTLFKLAE MEKKHSEFWR EIAEKRGLKV 
KGKLSTLNKI KVDFYSLLRK ILGLDITIKV LESSEEDDIE KYRKLSEMEM FSSEEKQRLK
DIMVDEAVHE KVLGNVEAKS VGDFVYGISD GLVEVLAAVS GLSGAISSPL FVAVGGLIVG
VSGTLSMAIG AYLSTKSEKD VKIQERKRLE LEKNVDQHSV QLRLVNFFTE LGVNLNLAKK
VSLSLVNVAE DILYPEVKEN PVKSALITGL SYITGAIIPI LPYLIGLSGL TGLITSYIVA
GLSTFIVGSI IGILSGISPF KKGIQMASLA LLAALGTHGL GYLASRFLNV SI