Gene Ssol_0192 details

Gene Information

• Locus tag: Ssol_0192
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 164297
• End bp: 165010
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 36%
• Product: NMD3 family protein
• Protein accession: ACX90488
• Protein GI: 261600885

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGGAA AATTCTGTGT ATTATGCGGA AAGCAAAATG TTGACCTAAT AGATTCGCTA 
TGTGTAGATT GCTATGTAAA GTCTAAAAAA TTGATAGAGA CGCCTAAAAG GGTAACCGGA 
AAGTATTGTA AGATCTGCGG TGCCCAGTGG ATTAGAGGTA AGTGGATAAG AACATCAGCA 
ACATCATTAG CTTCCGTAGT GGAGGATATT ATAGCAAGAG AATTAGGGAG TAAGATGAGG 
ATTGACAAAA ACGTGGATGA GTTCGCATTT GATATAAAGA GCATATGGAA GGATCCAAGT 
GGTAATTCTT TTGCGACTAT TGAGTTTAGA GGTAAGGTAA GAGGTAAATC ATTTTCCCAA 
GAAGCTGTAA TAAGCTTAGA AATGGAAAGG GAGCTGTGTG ACTCATGTTT TAGGAAGAAG 
ACACGATATT ATGAGGCTAT AGTTCAACTT AGGAGTAAAG GTAAGATTGG AGTCGATGAT 
AAAAAGAGAG CGTTCTTCGA ATCCTTTTTC TCTACAAGTA TTGTAGATAA TATTTCCGAT 
GTTATTGAAG GTAGAGAGGG TGTTGATTAT TATTTTATGA GTAAAAGTGT TGCAAGAAAG 
CTTGTATCGA TGATATCTTC TATTGTGGAC GTTGAAGTTA ATGAGAGTTA TCAGAATGAA 
AAGATGAAAA ACGGTAAAAG GGAGGCAAAA CTAGTTATTT CATTGAGGAT ATGA 

 

Protein sequence

MSGKFCVLCG KQNVDLIDSL CVDCYVKSKK LIETPKRVTG KYCKICGAQW IRGKWIRTSA 
TSLASVVEDI IARELGSKMR IDKNVDEFAF DIKSIWKDPS GNSFATIEFR GKVRGKSFSQ 
EAVISLEMER ELCDSCFRKK TRYYEAIVQL RSKGKIGVDD KKRAFFESFF STSIVDNISD 
VIEGREGVDY YFMSKSVARK LVSMISSIVD VEVNESYQNE KMKNGKREAK LVISLRI