Gene Ssol_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0123 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp106214 
End bp107032 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content35% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionACX90423 
Protein GI261600820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACTG TAAAACTCAC AAAGAACATT ACGATTATGA CAGGTAGTCC AAATACGTTA 
ATTTATGATA ATAGAGTCGT AATAGATCTA GGAGGAAAGA ACTCATCAGT AGATATAAAT
GCTGAAGTTC AATTAGCTAC GCATGGTCAT GCTGATCATA TAGCCGGTTT ACTAAAGAAG
GACGCTAAAA TAAGGTATCT TCCGAAGGAG GATTATTGGT CATTAACCTT GATGGGGAGA
AGAGCGATGA TTTATGGGTG CAGCTCAAAG GATTCCGATA TCTTTACCTT TGATTACGTG
AAAGAGAATA TCGAATCTAT TGACATTGAG GTTCGAACTT CAGAGATTGA GGTGATAAAA
CTACCTGGTC ATACGCCAGG TCATAGCGGT TACATAGTTG ACAATGTCCT TTATGCAGGT
GATGCGTTTT TTGGTGAAAA AGTACTAGAA GGTTTCTCAG TTCCCTTTTA CACCGATTTC
TGGACTGCTT TAGAATCACT GAATAAGGTT AAAGAATTAG CAAAGAGTGT TAATAATATA
GTGATAAGTC ATGGTCCAGT TTACACTAAT AAAAATAAGA TGGTCTCGAT TTTAGAGAGC
AATATAATTT ACGCTCAGAA CTTAATAGGA AAAATCTTGG ACATGCTGTC AAACAATGAG
CTTACAGTGG AGGAGATTGT GGTCAAGTTA AAGCAAGATT TAACACCAAG TAATGTATTG
TTAAATTCAG TAGTTGTGAG GTCAATACTA TTTGGGTTAG AAAATATTGA GTATAATGTA
TCTCAAAAAG GTTTAGTTTT TAGAAGAAGA GTTCATTAA
 
Protein sequence
MPTVKLTKNI TIMTGSPNTL IYDNRVVIDL GGKNSSVDIN AEVQLATHGH ADHIAGLLKK 
DAKIRYLPKE DYWSLTLMGR RAMIYGCSSK DSDIFTFDYV KENIESIDIE VRTSEIEVIK
LPGHTPGHSG YIVDNVLYAG DAFFGEKVLE GFSVPFYTDF WTALESLNKV KELAKSVNNI
VISHGPVYTN KNKMVSILES NIIYAQNLIG KILDMLSNNE LTVEEIVVKL KQDLTPSNVL
LNSVVVRSIL FGLENIEYNV SQKGLVFRRR VH