Gene Ssol_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0102 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp87338 
End bp89167 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content34% 
IMG OID 
ProductHerA-ATP synthase, barrel domain protein 
Protein accessionACX90403 
Protein GI261600800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCTCAG ATGTTCCGTT ATATAATGAT ATAAAGGATA GGATATCTAG GGCAAGAGCA 
TTAGCCTTAA CGTTGGGTGA TTTGGTAGGA AAGGTTTCTA GATATATTCC TAACAAACTT
GATGAGGAAA ATAATGTCGT AAACGTAACT GTAGATCCGA ATACTTACTA TAAATATCCC
TTTCTGGGTA AGATAGGTAT CTTTTTGGGT GCTATAGATA TAAAGACATT ATATTTTGTT
TTACTGAGAG TTATAGGTTA TGAAAGAAAT GACGCATCAT CTCTCTTTAT GGGAGATTCT
AATGTATTAA ATAATATAGG ATTAAGTGAT GATGAACCGG GATCATTAAT AACTAATGTT
ACCCTAAGAT GTGAAATGTT AACTAAGGTA GACTTTCTTT CCTCTTCTGA ACCCGATGGT
GCAGACATTA TATTAGAGCC GCAATCACCG GTGATAATCC CTAAGGCGGA AGTTATAGAG
AGATCTCTAG GTACTACTAG AGGATTATTA AGATTAGGTT TTTTAGATGT TGCATATAGT
AAAGTTAGAG TAAGTACAAG CCTTGATGAT CTGAATTTCC ATATGCTAAT ATTAGGGACT
ACTGGAGCAG GTAAAACTTC ATTTATAAAA GACTTAATAG CTGGTCTTAA TGTAACTAAT
GAGGAAGGTA GTAAGATCTT TATCCTTGAT GCTACCGGTG ATTATTATCA TATTTTCCTG
CCTCCAGATA AATCCGATAA GGTAGTTATG AAAGGCGTAG AGGAATTTAC TCAATTGTAT
GGGGCAATAG TTAAGGGCAT CAATGTAGAT ATCATCTATC CTATCAGCAA ATCCTGGGTA
AAAAAGTATT TAGATGGTGC CAAATCTGCT GGGTCTATAA CTAAAATGTA CTTCGATATG
TTTGTAAAAC CAATACTTAA CCATTTAAAT AATAAGGGTA TTTCCATTTA CGCTTCCATA
ATAAATAATA AGATTATTAT TTCCAATGCA GATTGGTCAT CTCAAGTTAC AGTTTATCCA
TTTTATTTTA GATTTAAAGA TGTAAAGACA ATTTTACATA AGCTTAATCC TTATTTTACT
GAGCAGGCGT CACATTTTAT AAAAATAATG ATAAGAAAAA AGGGTAAAGA TATAGCAAAT
CTAGACGATT TGATAGATCA ATTTAATGAG AATAGTTTAG AAGGTGTCGA AATTCATAAA
AGCACAAGAG AAAATATCGT TAGAGGCTTG TATTTGCTAA AGGAGACCCA ACTTTTCGAT
GTCGGTGTAG AGAGGTTTCC ATTAGGTAAG ATTCTTAAAG ATTCTTCTTC ATCTACACTA
ATTTTTGATC TATACAATAG TGAGCTTGAT GATTTCTCTC AGAAAATTTT AACATATTAT
TTCCTAGACC GCTTATTTGA ATTTAGGGAG AGGCAAATGC GTAGTGGAAA TGTGAAAGGA
AGAAATGTGA TAATTATTGA TGAGGCGCAT AGGTTCTTTC CATCATCTAA AGGAGGTGAA
GAGGATACCA ACTATATTAG AAGGGTTGCG GGTAAAATAG CTACCATGAT GAGATTGGGT
AGGAGGAGGA AGATTGGTTT TGTGTTTGCC ACTCATAATC CTAATGACTT AAGTGATATA
ATTATACAGT TAGCAAATAC TAAGATTATA TTTAGAATTA AGTCAGAAGT TGCTGAAGCT
TTAGGTCTGT CTAAGACTGA GGCTAAGATA TTAAACTGGG AGAGAAATGG TGTAGCCTAT
TTGCTGACAC CTTGGCTTAG AGAAGGTAAA ATTAAGATAA AAGCTCCGGT GCCTCCTCCA
TTAGGTCATT ACGATTTGTC TAAAACATAA
 
Protein sequence
MSSDVPLYND IKDRISRARA LALTLGDLVG KVSRYIPNKL DEENNVVNVT VDPNTYYKYP 
FLGKIGIFLG AIDIKTLYFV LLRVIGYERN DASSLFMGDS NVLNNIGLSD DEPGSLITNV
TLRCEMLTKV DFLSSSEPDG ADIILEPQSP VIIPKAEVIE RSLGTTRGLL RLGFLDVAYS
KVRVSTSLDD LNFHMLILGT TGAGKTSFIK DLIAGLNVTN EEGSKIFILD ATGDYYHIFL
PPDKSDKVVM KGVEEFTQLY GAIVKGINVD IIYPISKSWV KKYLDGAKSA GSITKMYFDM
FVKPILNHLN NKGISIYASI INNKIIISNA DWSSQVTVYP FYFRFKDVKT ILHKLNPYFT
EQASHFIKIM IRKKGKDIAN LDDLIDQFNE NSLEGVEIHK STRENIVRGL YLLKETQLFD
VGVERFPLGK ILKDSSSSTL IFDLYNSELD DFSQKILTYY FLDRLFEFRE RQMRSGNVKG
RNVIIIDEAH RFFPSSKGGE EDTNYIRRVA GKIATMMRLG RRRKIGFVFA THNPNDLSDI
IIQLANTKII FRIKSEVAEA LGLSKTEAKI LNWERNGVAY LLTPWLREGK IKIKAPVPPP
LGHYDLSKT