Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0102 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 87338 |
End bp | 89167 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | HerA-ATP synthase, barrel domain protein |
Protein accession | ACX90403 |
Protein GI | 261600800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCTCAG ATGTTCCGTT ATATAATGAT ATAAAGGATA GGATATCTAG GGCAAGAGCA TTAGCCTTAA CGTTGGGTGA TTTGGTAGGA AAGGTTTCTA GATATATTCC TAACAAACTT GATGAGGAAA ATAATGTCGT AAACGTAACT GTAGATCCGA ATACTTACTA TAAATATCCC TTTCTGGGTA AGATAGGTAT CTTTTTGGGT GCTATAGATA TAAAGACATT ATATTTTGTT TTACTGAGAG TTATAGGTTA TGAAAGAAAT GACGCATCAT CTCTCTTTAT GGGAGATTCT AATGTATTAA ATAATATAGG ATTAAGTGAT GATGAACCGG GATCATTAAT AACTAATGTT ACCCTAAGAT GTGAAATGTT AACTAAGGTA GACTTTCTTT CCTCTTCTGA ACCCGATGGT GCAGACATTA TATTAGAGCC GCAATCACCG GTGATAATCC CTAAGGCGGA AGTTATAGAG AGATCTCTAG GTACTACTAG AGGATTATTA AGATTAGGTT TTTTAGATGT TGCATATAGT AAAGTTAGAG TAAGTACAAG CCTTGATGAT CTGAATTTCC ATATGCTAAT ATTAGGGACT ACTGGAGCAG GTAAAACTTC ATTTATAAAA GACTTAATAG CTGGTCTTAA TGTAACTAAT GAGGAAGGTA GTAAGATCTT TATCCTTGAT GCTACCGGTG ATTATTATCA TATTTTCCTG CCTCCAGATA AATCCGATAA GGTAGTTATG AAAGGCGTAG AGGAATTTAC TCAATTGTAT GGGGCAATAG TTAAGGGCAT CAATGTAGAT ATCATCTATC CTATCAGCAA ATCCTGGGTA AAAAAGTATT TAGATGGTGC CAAATCTGCT GGGTCTATAA CTAAAATGTA CTTCGATATG TTTGTAAAAC CAATACTTAA CCATTTAAAT AATAAGGGTA TTTCCATTTA CGCTTCCATA ATAAATAATA AGATTATTAT TTCCAATGCA GATTGGTCAT CTCAAGTTAC AGTTTATCCA TTTTATTTTA GATTTAAAGA TGTAAAGACA ATTTTACATA AGCTTAATCC TTATTTTACT GAGCAGGCGT CACATTTTAT AAAAATAATG ATAAGAAAAA AGGGTAAAGA TATAGCAAAT CTAGACGATT TGATAGATCA ATTTAATGAG AATAGTTTAG AAGGTGTCGA AATTCATAAA AGCACAAGAG AAAATATCGT TAGAGGCTTG TATTTGCTAA AGGAGACCCA ACTTTTCGAT GTCGGTGTAG AGAGGTTTCC ATTAGGTAAG ATTCTTAAAG ATTCTTCTTC ATCTACACTA ATTTTTGATC TATACAATAG TGAGCTTGAT GATTTCTCTC AGAAAATTTT AACATATTAT TTCCTAGACC GCTTATTTGA ATTTAGGGAG AGGCAAATGC GTAGTGGAAA TGTGAAAGGA AGAAATGTGA TAATTATTGA TGAGGCGCAT AGGTTCTTTC CATCATCTAA AGGAGGTGAA GAGGATACCA ACTATATTAG AAGGGTTGCG GGTAAAATAG CTACCATGAT GAGATTGGGT AGGAGGAGGA AGATTGGTTT TGTGTTTGCC ACTCATAATC CTAATGACTT AAGTGATATA ATTATACAGT TAGCAAATAC TAAGATTATA TTTAGAATTA AGTCAGAAGT TGCTGAAGCT TTAGGTCTGT CTAAGACTGA GGCTAAGATA TTAAACTGGG AGAGAAATGG TGTAGCCTAT TTGCTGACAC CTTGGCTTAG AGAAGGTAAA ATTAAGATAA AAGCTCCGGT GCCTCCTCCA TTAGGTCATT ACGATTTGTC TAAAACATAA
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Protein sequence | MSSDVPLYND IKDRISRARA LALTLGDLVG KVSRYIPNKL DEENNVVNVT VDPNTYYKYP FLGKIGIFLG AIDIKTLYFV LLRVIGYERN DASSLFMGDS NVLNNIGLSD DEPGSLITNV TLRCEMLTKV DFLSSSEPDG ADIILEPQSP VIIPKAEVIE RSLGTTRGLL RLGFLDVAYS KVRVSTSLDD LNFHMLILGT TGAGKTSFIK DLIAGLNVTN EEGSKIFILD ATGDYYHIFL PPDKSDKVVM KGVEEFTQLY GAIVKGINVD IIYPISKSWV KKYLDGAKSA GSITKMYFDM FVKPILNHLN NKGISIYASI INNKIIISNA DWSSQVTVYP FYFRFKDVKT ILHKLNPYFT EQASHFIKIM IRKKGKDIAN LDDLIDQFNE NSLEGVEIHK STRENIVRGL YLLKETQLFD VGVERFPLGK ILKDSSSSTL IFDLYNSELD DFSQKILTYY FLDRLFEFRE RQMRSGNVKG RNVIIIDEAH RFFPSSKGGE EDTNYIRRVA GKIATMMRLG RRRKIGFVFA THNPNDLSDI IIQLANTKII FRIKSEVAEA LGLSKTEAKI LNWERNGVAY LLTPWLREGK IKIKAPVPPP LGHYDLSKT
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