Gene Ssol_0009 details

Gene Information

• Locus tag: Ssol_0009
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 6229
• End bp: 7032
• Gene Length: 804 bp
• Protein Length: 267 aa
• Translation table: 11
• GC content: 33%
• Product: TPR repeat-containing protein
• Protein accession: ACX90315
• Protein GI: 261600712

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTATTT TATCAAAAAG ATTAATTGAT ATATTAAGTG AGAGTTTGAG CCTAAAAGAA 
GCCTATACCC AATATAAGAA TAAGAACTTA AATTATGCAT TGAAATTATT AGACGAGTTA 
ATTACCCAGA ACCCAGATCT AAAGGAGGCC TACTCCTTAA AAGGAAAGAT ACTCTTTGAA 
CTAGGAAAAC TACAAGAGGC TTATGAGAAT TTTCAGAAGG CTGAAGATAA AATTGGAATG 
GCAAAAGTAC TTATAGCTCA AGGACTTTAT AGAGACGCGC TAATATATCT AAATGACAAT 
TCAAAAGATT CTAGAAAACT AAGGGGACTT ATCTATTTAA AATTAGAAAA CTATGAGAAA 
GCCCTAGATG AGATCAAGGT AGTAGAAGAC GAAGATCCTT TAGTGTATAA GATACGGGGA 
ATTTCCGAAC TTAAATTAGG TAAATACAAT GATGCTATAA TTGACTTGAG TTTAGCTATT 
GAAAAATATC CTACTGATGC AGAATTGTAC TTCTATAGAG CTTTAGCTCA AAGAGAATTA 
GGAAACTATA AGGAGGCTGA AAATGATTTA GAAATCGCAA TTAATCTAAA CCCATACTAT 
GCAGAAGTTT ACTTCAGTTT AGGAGAATTA AAGGAAAGTA GGGGATTGTT AGAAGAAGCT 
GTAGATATGT ATTCGAAAAG TATCAATATC AATCCATTGT ATAGAAATGC TTACGTAAGA 
AGAGCGAAAT CGTTGATGAA ATTGGGGAGA GAAGAGGAGG CTTATGCGGA TATTCGAAAA 
GCTAACGAAC TAAATAGCTC TTAA 

 

Protein sequence

MLILSKRLID ILSESLSLKE AYTQYKNKNL NYALKLLDEL ITQNPDLKEA YSLKGKILFE 
LGKLQEAYEN FQKAEDKIGM AKVLIAQGLY RDALIYLNDN SKDSRKLRGL IYLKLENYEK 
ALDEIKVVED EDPLVYKIRG ISELKLGKYN DAIIDLSLAI EKYPTDAELY FYRALAQREL 
GNYKEAENDL EIAINLNPYY AEVYFSLGEL KESRGLLEEA VDMYSKSINI NPLYRNAYVR 
RAKSLMKLGR EEEAYADIRK ANELNSS