Gene Ssol_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0001 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp105 
End bp1343 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content36% 
IMG OID 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionACX90307 
Protein GI261600704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0183219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA TACCAGAAGA TGGAGAAGTA ATTAAATTTG AAAATGGGAA ATGGATTGTA 
CCAAAAAAGC CAATAATTCT GTATGTTGAA GGGGATGGAA TAGGGCATGA AATAACACAT
GCTGCTATGA AGGTTATAAA CAAAGCAGTG GAAAAAGCTT ATGGATCTGA TAGAGAAATT
AAGTGGGTAG AAGTTCTAGC AGGAGATAAG GCAGAAAAGC TAACCGGAAA TAGATTTCCT
AAAGAGTCAG AGGAATTGAT AGAGAAGTAT AGAGTCTTAT TAAAAGGTCC CCTAGAAACA
CCAATAGGCA AAGGCTGGAA ATCCATCAAT GTAGCAATTA GATTAATGTT GGATCTTTAT
GCAAATATAA GACCAGTAAA ATACATTCCA GGTATAGAAA GTCCAATTAA GAACGCAGAT
AAGATTGACC TTATAATATT TAGGGAAAAT ACTGATGATT TGTACAGAGG AATAGAGTAT
CCTTATGACA GTGAACAAGC AAAGAAAATT AGAGATTTTC TAAGAAAGGA GCTAGGAGTG
GAAGTGGAAG ATGATACTGG AATTGGTATA AAACTTATCA GTAGATTTAA GACGCAAAGG
ATTGCGAGAA TGGCTATAAA ATACGCTATA GACCATAAAC GAAAGAAAGT TACAATAATG
CATAAAGGTA ATGTGATGAA ATATACCGAA GGAGCATTTA GAGAATGGTC ATATGAAGTT
GCAACAAAAG AATTTAGAGA TTATATAGTT ACTGAGGAAG AGGTAACAAA GAATTATAAT
GGAGTACCTC CTTCTGGGAA GGTCATAATA AATGATAGGA TAGCTGATAA CATGTTCCAA
CAGATAATTA TCAGACCAGA CGAGTACGAT ATAATATTAG CACCTAACGT AAATGGGGAT
TACATATCGG ATGCTGCGGG CGCACTGGTA GGAAATATTG GTATGTTAGG CGGTGCAAAT
ATAGGAGATA CTGGAGGTAT GTTCGAGGCA ATACATGGTA CCGCACCTAA GTATGCTGGT
AAGAATGTTG CAAACCCCAC TGGAATAATA AAAGGTGGTG AGTTAATGTT AAGATTTATG
GGATGGGATA AGGCTGCTGA GTTAATAGAT TCTGCAATCA TGGAATCTAT AAGACAGAAG
AAGGTTACTC AGGATTTAGC TAGATTTATG GGTGTAAGAG CCTTATCAAC TACTGAATAT
ACTGACGAGC TAATTGCGAT AATCGATACA CTATCATAA
 
Protein sequence
MQKIPEDGEV IKFENGKWIV PKKPIILYVE GDGIGHEITH AAMKVINKAV EKAYGSDREI 
KWVEVLAGDK AEKLTGNRFP KESEELIEKY RVLLKGPLET PIGKGWKSIN VAIRLMLDLY
ANIRPVKYIP GIESPIKNAD KIDLIIFREN TDDLYRGIEY PYDSEQAKKI RDFLRKELGV
EVEDDTGIGI KLISRFKTQR IARMAIKYAI DHKRKKVTIM HKGNVMKYTE GAFREWSYEV
ATKEFRDYIV TEEEVTKNYN GVPPSGKVII NDRIADNMFQ QIIIRPDEYD IILAPNVNGD
YISDAAGALV GNIGMLGGAN IGDTGGMFEA IHGTAPKYAG KNVANPTGII KGGELMLRFM
GWDKAAELID SAIMESIRQK KVTQDLARFM GVRALSTTEY TDELIAIIDT LS