Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0001 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 105 |
End bp | 1343 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | ACX90307 |
Protein GI | 261600704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0183219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGA TACCAGAAGA TGGAGAAGTA ATTAAATTTG AAAATGGGAA ATGGATTGTA CCAAAAAAGC CAATAATTCT GTATGTTGAA GGGGATGGAA TAGGGCATGA AATAACACAT GCTGCTATGA AGGTTATAAA CAAAGCAGTG GAAAAAGCTT ATGGATCTGA TAGAGAAATT AAGTGGGTAG AAGTTCTAGC AGGAGATAAG GCAGAAAAGC TAACCGGAAA TAGATTTCCT AAAGAGTCAG AGGAATTGAT AGAGAAGTAT AGAGTCTTAT TAAAAGGTCC CCTAGAAACA CCAATAGGCA AAGGCTGGAA ATCCATCAAT GTAGCAATTA GATTAATGTT GGATCTTTAT GCAAATATAA GACCAGTAAA ATACATTCCA GGTATAGAAA GTCCAATTAA GAACGCAGAT AAGATTGACC TTATAATATT TAGGGAAAAT ACTGATGATT TGTACAGAGG AATAGAGTAT CCTTATGACA GTGAACAAGC AAAGAAAATT AGAGATTTTC TAAGAAAGGA GCTAGGAGTG GAAGTGGAAG ATGATACTGG AATTGGTATA AAACTTATCA GTAGATTTAA GACGCAAAGG ATTGCGAGAA TGGCTATAAA ATACGCTATA GACCATAAAC GAAAGAAAGT TACAATAATG CATAAAGGTA ATGTGATGAA ATATACCGAA GGAGCATTTA GAGAATGGTC ATATGAAGTT GCAACAAAAG AATTTAGAGA TTATATAGTT ACTGAGGAAG AGGTAACAAA GAATTATAAT GGAGTACCTC CTTCTGGGAA GGTCATAATA AATGATAGGA TAGCTGATAA CATGTTCCAA CAGATAATTA TCAGACCAGA CGAGTACGAT ATAATATTAG CACCTAACGT AAATGGGGAT TACATATCGG ATGCTGCGGG CGCACTGGTA GGAAATATTG GTATGTTAGG CGGTGCAAAT ATAGGAGATA CTGGAGGTAT GTTCGAGGCA ATACATGGTA CCGCACCTAA GTATGCTGGT AAGAATGTTG CAAACCCCAC TGGAATAATA AAAGGTGGTG AGTTAATGTT AAGATTTATG GGATGGGATA AGGCTGCTGA GTTAATAGAT TCTGCAATCA TGGAATCTAT AAGACAGAAG AAGGTTACTC AGGATTTAGC TAGATTTATG GGTGTAAGAG CCTTATCAAC TACTGAATAT ACTGACGAGC TAATTGCGAT AATCGATACA CTATCATAA
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Protein sequence | MQKIPEDGEV IKFENGKWIV PKKPIILYVE GDGIGHEITH AAMKVINKAV EKAYGSDREI KWVEVLAGDK AEKLTGNRFP KESEELIEKY RVLLKGPLET PIGKGWKSIN VAIRLMLDLY ANIRPVKYIP GIESPIKNAD KIDLIIFREN TDDLYRGIEY PYDSEQAKKI RDFLRKELGV EVEDDTGIGI KLISRFKTQR IARMAIKYAI DHKRKKVTIM HKGNVMKYTE GAFREWSYEV ATKEFRDYIV TEEEVTKNYN GVPPSGKVII NDRIADNMFQ QIIIRPDEYD IILAPNVNGD YISDAAGALV GNIGMLGGAN IGDTGGMFEA IHGTAPKYAG KNVANPTGII KGGELMLRFM GWDKAAELID SAIMESIRQK KVTQDLARFM GVRALSTTEY TDELIAIIDT LS
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