| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_4256 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4620745 |
|---|
| End bp | 4621704 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | ACX41854 |
|---|
| Protein GI | 260451432 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 78 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT CCATCACCAC GCTTGATCTC AATCTGCTGC TTTGTCTGCA ACTGCTGATG
CAGGAGCGCA GCGTAACCAA AGCGGCGAAG CGGATAAACG TGACACCTTC GGCGGTGAGT
AAGTCGCTGG CAAAGTTAAG AGCGTGGTTT GACGACCCGC TCTTTGTGAA CTCACCGCTG
GGTCTGTCGC CCACACCGCT GATGGTCAGC ATGGAGCAAA ATCTGGCGGA GTGGATGCAA
ATGAGCAACC TGCTGCTGGA TAAACCGCAC CACCAGACAC CGCGCGGCCT GAAGTTTGAG
CTGGCGGCGG AATCACCGCT GATGATGATC ATGCTTAATG CGCTGTCGAA ACAGATCTAC
CAACGTTACC CGCAGGCGAC CATCAAATTA CGTAACTGGG ATTACGATTC CTTAGATGCC
ATTACTCGTG GTGAAGTGGA TATCGGTTTT TCCGGTCGCG AAAGCCATCC TCGCTCGCGG
GAGCTGTTAA GCTCGCTACC GTTAGCCATT GATTATGAAG TGCTGTTTAG TGATGTGCCC
TGCGTCTGGT TACGCAAAGA TCATCCGGCA CTGCATCAAA CGTGGAATCT GGACACCTTC
TTACGTTATC CGCATATCAG CATTTGCTGG GAACAGAGCG ATACCTGGGC GCTGGACAAT
GTGTTACAGG AGCTGGGACG CGAACGCACG ATTGCTATGA GCCTGCCGGA ATTCGAGCAG
TCACTGTTTA TGGCAGCGCA ACCCGACAAT CTGCTACTGG CGACCGCGCC GCGCTACTGT
CAGTACTACA ATCAACTCCA TCAACTGCCG TTGGTTGCTC TTCCTCTCCC GTTTGACGAA
AGCCAGCAAA AAAAGCTGGA AGTTCCTTTT ACCCTGCTGT GGCATAAACG GAACAGCCAT
AATCCGAAGA TCGTCTGGTT ACGGGAAACC ATTAAAAACC TTTACGCGTC GATGGCATAA
|
|---|
| Protein sequence | MKKSITTLDL NLLLCLQLLM QERSVTKAAK RINVTPSAVS KSLAKLRAWF DDPLFVNSPL
GLSPTPLMVS MEQNLAEWMQ MSNLLLDKPH HQTPRGLKFE LAAESPLMMI MLNALSKQIY
QRYPQATIKL RNWDYDSLDA ITRGEVDIGF SGRESHPRSR ELLSSLPLAI DYEVLFSDVP
CVWLRKDHPA LHQTWNLDTF LRYPHISICW EQSDTWALDN VLQELGRERT IAMSLPEFEQ
SLFMAAQPDN LLLATAPRYC QYYNQLHQLP LVALPLPFDE SQQKKLEVPF TLLWHKRNSH
NPKIVWLRET IKNLYASMA
|
|---|
| |