Gene EcDH1_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4253 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4617860 
End bp4619197 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content54% 
IMG OID 
ProductXanthine/uracil/vitamin C permease 
Protein accessionACX41851 
Protein GI260451429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATC AACATACCAC CCAGACTTCT GGTCAGGGGA TGCTGGAACG CGTGTTTAAA 
CTGCGCGAAC ATGGCACGAC GGCACGGACC GAAGTGATCG CCGGTTTTAC CACCTTCCTG
ACGATGGTTT ACATCGTTTT TGTTAACCCG CAAATTCTTG GCGTTGCTGG CATGGATACC
AGCGCCGTCT TCGTCACTAC CTGTCTGATC GCTGCATTCG GCAGTATTAT GATGGGACTG
TTTGCTAACC TGCCAGTTGC ACTGGCACCC GCTATGGGCC TGAATGCGTT CTTCGCTTTT
GTCGTTGTAC AGGCGATGGG CTTGCCGTGG CAGGTCGGGA TGGGCGCAAT CTTCTGGGGC
GCGATAGGTC TGCTGTTACT GACGATTTTC CGCGTTCGCT ACTGGATGAT AGCCAACATT
CCGGTGAGTC TGCGTGTGGG TATTACCAGC GGTATCGGTC TGTTCATTGG CATGATGGGG
CTGAAAAACG CAGGTGTGAT TGTCGCTAAC CCGGAAACGC TGGTGAGCAT CGGTAATCTG
ACTTCTCACA GCGTACTTCT GGGTATCCTC GGCTTCTTCA TCATTGCTAT TCTGGCCTCG
CGCAACATTC ACGCAGCGGT GCTGGTTTCT ATCGTGGTGA CGACGCTGCT GGGCTGGATG
CTGGGTGATG TGCACTACAA TGGCATCGTT TCTGCGCCGC CGAGCGTAAT GACAGTTGTG
GGTCATGTAG ATTTAGCCGG GTCGTTTAAC CTCGGGCTGG CAGGGGTGAT TTTCTCTTTC
ATGTTGGTCA ACTTGTTTGA CTCCTCCGGT ACGCTGATTG GCGTGACCGA TAAAGCAGGT
CTGGCGGATG AGAAGGGGAA ATTCCCGCGC ATGAAGCAGG CGCTGTATGT CGACAGTATC
TCTTCCGTGA CCGGTTCGTT TATCGGTACT TCTTCCGTTA CGGCTTATAT TGAGTCCTCT
TCCGGCGTAT CGGTTGGCGG TCGTACCGGT CTGACGGCAG TGGTTGTTGG TCTGCTGTTC
CTGCTGGTTA TCTTTCTGTC GCCGCTGGCG GGGATGGTGC CAGGCTACGC TGCAGCTGGT
GCGCTGATTT ACGTTGGCGT GCTGATGACT TCCAGTCTGG CACGCGTGAA CTGGCAGGAT
CTTACTGAAT CTGTTCCGGC GTTTATTACC GCCGTGATGA TGCCGTTCAG CTTCTCGATT
ACCGAAGGTA TCGCGCTGGG CTTTATCTCC TACTGCGTGA TGAAAATCGG TACCGGACGT
CTGCGTGATC TAAGCCCGTG CGTAATCATC GTTGCGCTGC TGTTTATCCT GAAGATTGTC
TTTATCGACG CTCACTAA
 
Protein sequence
MSHQHTTQTS GQGMLERVFK LREHGTTART EVIAGFTTFL TMVYIVFVNP QILGVAGMDT 
SAVFVTTCLI AAFGSIMMGL FANLPVALAP AMGLNAFFAF VVVQAMGLPW QVGMGAIFWG
AIGLLLLTIF RVRYWMIANI PVSLRVGITS GIGLFIGMMG LKNAGVIVAN PETLVSIGNL
TSHSVLLGIL GFFIIAILAS RNIHAAVLVS IVVTTLLGWM LGDVHYNGIV SAPPSVMTVV
GHVDLAGSFN LGLAGVIFSF MLVNLFDSSG TLIGVTDKAG LADEKGKFPR MKQALYVDSI
SSVTGSFIGT SSVTAYIESS SGVSVGGRTG LTAVVVGLLF LLVIFLSPLA GMVPGYAAAG
ALIYVGVLMT SSLARVNWQD LTESVPAFIT AVMMPFSFSI TEGIALGFIS YCVMKIGTGR
LRDLSPCVII VALLFILKIV FIDAH