Gene EcDH1_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4235 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4597094 
End bp4598476 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content55% 
IMG OID 
ProductATP synthase F1, beta subunit 
Protein accessionACX41833 
Protein GI260451411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACTG GAAAGATTGT CCAGGTAATC GGCGCCGTAG TTGACGTCGA ATTCCCTCAG 
GATGCCGTAC CGCGCGTGTA CGATGCTCTT GAGGTGCAAA ATGGTAATGA GCGTCTGGTG
CTGGAAGTTC AGCAGCAGCT CGGCGGCGGT ATCGTACGTA CCATCGCAAT GGGTTCCTCC
GACGGTCTGC GTCGCGGTCT GGATGTAAAA GACCTCGAAC ACCCGATTGA AGTCCCGGTA
GGTAAAGCGA CTCTGGGCCG TATCATGAAC GTACTGGGTG AACCGGTCGA CATGAAAGGC
GAGATCGGTG AAGAAGAGCG TTGGGCGATT CACCGCGCAG CACCTTCCTA CGAAGAGCTG
TCAAACTCTC AGGAACTGCT GGAAACCGGT ATCAAAGTTA TCGACCTGAT GTGTCCGTTC
GCTAAGGGCG GTAAAGTTGG TCTGTTCGGT GGTGCGGGTG TAGGTAAAAC CGTAAACATG
ATGGAGCTCA TTCGTAACAT CGCGATCGAG CACTCCGGTT ACTCTGTGTT TGCGGGCGTA
GGTGAACGTA CTCGTGAGGG TAACGACTTC TACCACGAAA TGACCGACTC CAACGTTATC
GACAAAGTAT CCCTGGTGTA TGGCCAGATG AACGAGCCGC CGGGAAACCG TCTGCGCGTT
GCTCTGACCG GTCTGACCAT GGCTGAGAAA TTCCGTGACG AAGGTCGTGA CGTTCTGCTG
TTCGTTGACA ACATCTATCG TTACACCCTG GCCGGTACGG AAGTATCCGC ACTGCTGGGC
CGTATGCCTT CAGCGGTAGG TTATCAGCCG ACCCTGGCGG AAGAGATGGG CGTTCTGCAG
GAACGTATCA CCTCCACCAA AACTGGTTCT ATCACCTCCG TACAGGCAGT ATACGTACCT
GCGGATGACT TGACTGACCC GTCTCCGGCA ACCACCTTTG CGCACCTTGA CGCAACCGTG
GTACTGAGCC GTCAGATCGC GTCTCTGGGT ATCTACCCGG CCGTTGACCC GCTGGACTCC
ACCAGCCGTC AGCTGGACCC GCTGGTGGTT GGTCAGGAAC ACTACGACAC CGCGCGTGGC
GTTCAGTCCA TCCTGCAACG TTATCAGGAA CTGAAAGACA TCATCGCCAT CCTGGGTATG
GATGAACTGT CTGAAGAAGA CAAACTGGTG GTAGCGCGTG CTCGTAAGAT CCAGCGCTTC
CTGTCCCAGC CGTTCTTCGT GGCAGAAGTA TTCACCGGTT CTCCGGGTAA ATACGTCTCC
CTGAAAGACA CCATCCGTGG CTTTAAAGGC ATCATGGAAG GCGAATACGA TCACCTGCCG
GAGCAGGCGT TCTACATGGT CGGTTCCATC GAAGAAGCTG TGGAAAAAGC CAAAAAACTT
TAA
 
Protein sequence
MATGKIVQVI GAVVDVEFPQ DAVPRVYDAL EVQNGNERLV LEVQQQLGGG IVRTIAMGSS 
DGLRRGLDVK DLEHPIEVPV GKATLGRIMN VLGEPVDMKG EIGEEERWAI HRAAPSYEEL
SNSQELLETG IKVIDLMCPF AKGGKVGLFG GAGVGKTVNM MELIRNIAIE HSGYSVFAGV
GERTREGNDF YHEMTDSNVI DKVSLVYGQM NEPPGNRLRV ALTGLTMAEK FRDEGRDVLL
FVDNIYRYTL AGTEVSALLG RMPSAVGYQP TLAEEMGVLQ ERITSTKTGS ITSVQAVYVP
ADDLTDPSPA TTFAHLDATV VLSRQIASLG IYPAVDPLDS TSRQLDPLVV GQEHYDTARG
VQSILQRYQE LKDIIAILGM DELSEEDKLV VARARKIQRF LSQPFFVAEV FTGSPGKYVS
LKDTIRGFKG IMEGEYDHLP EQAFYMVGSI EEAVEKAKKL