Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_4180 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 4532198 |
End bp | 4533583 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | ACX41780 |
Protein GI | 260451358 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000115482 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATA ACAAACCAGA GCTACAGCGT GGGCTGGAAG CTCGACATAT CGAACTCATC GCCCTGGGGG GCACCATTGG CGTCGGCCTG TTTATGGGGG CCGCCAGTAC CCTGAAATGG GCCGGGCCAT CCGTATTGTT GGCCTATATC ATCGCCGGGC TGTTCGTCTT TTTCATCATG CGTTCAATGG GCGAAATGTT GTTCCTCGAA CCGGTTACCG GTTCGTTCGC CGTTTATGCG CATCGTTATA TGAGCCCGTT CTTTGGCTAT CTCACCGCCT GGTCTTACTG GTTTATGTGG ATGGCGGTGG GGATCTCTGA AATCACCGCC ATTGGCGTTT ATGTCCAGTT CTGGTTCCCG GAGATGGCGC AGTGGATACC CGCATTGATC GCAGTGGCGC TGGTGGCGTT GGCGAATCTG GCGGCGGTGC GGTTGTACGG CGAAATCGAG TTCTGGTTCG CGATGATCAA AGTCACCACG ATTATCGTGA TGATTGTCAT TGGCCTGGGC GTGATTTTCT TTGGCTTTGG CAATGGCGGG CAGTCGATTG GTTTTAGCAA TCTCACAGAG CATGGCGGTT TCTTTGCGGG TGGCTGGAAA GGGTTCCTGA CCGCTCTGTG TATTGTGGTG GCGTCCTACC AGGGCGTGGA GCTGATTGGC ATTACTGCCG GTGAAGCGAA GAATCCGCAG GTGACGCTGC GCAGTGCCGT AGGCAAGGTG CTGTGGCGGA TCCTGATTTT CTACGTAGGC GCGATTTTCG TTATCGTCAC CATCTTCCCG TGGAATGAAA TAGGCAGCAA CGGCAGCCCG TTCGTACTGA CTTTTGCCAA AATCGGTATT ACCGCAGCGG CGGGCATTAT CAACTTTGTG GTGCTGACGG CTGCGCTCTC TGGCTGTAAC AGCGGCATGT ACAGTTGCGG ACGTATGCTC TACGCACTGG CGAAAAACCG TCAGTTACCG GCGGCAATGG CGAAAGTTTC CCGTCACGGC GTACCGGTTG CGGGTGTGGC AGTATCTATT GCTATTCTGC TAATTGGCTC ATGCCTGAAC TACATCATTC CCAATCCGCA GCGTGTGTTT GTCTACGTCT ACAGTGCCAG CGTGCTTCCG GGGATGGTGC CATGGTTTGT GATATTGATA AGCCAGCTGC GTTTTCGGCG TGCACATAAA GCGGCGATTG CCAGCCATCC GTTCCGCTCA ATCCTGTTCC CGTGGGCCAA TTACGTAACA ATGGCATTCC TGATTTGCGT TTTGATCGGC ATGTACTTTA ATGAAGATAC GCGTATGTCG CTGTTTGTTG GCATCATCTT TATGCTGGCG GTGACGGCGA TTTATAAAGT TTTTGGCCTT AATCGCCACG GGAAAGCGCA TAAACTGGAG GAATAA
|
Protein sequence | MADNKPELQR GLEARHIELI ALGGTIGVGL FMGAASTLKW AGPSVLLAYI IAGLFVFFIM RSMGEMLFLE PVTGSFAVYA HRYMSPFFGY LTAWSYWFMW MAVGISEITA IGVYVQFWFP EMAQWIPALI AVALVALANL AAVRLYGEIE FWFAMIKVTT IIVMIVIGLG VIFFGFGNGG QSIGFSNLTE HGGFFAGGWK GFLTALCIVV ASYQGVELIG ITAGEAKNPQ VTLRSAVGKV LWRILIFYVG AIFVIVTIFP WNEIGSNGSP FVLTFAKIGI TAAAGIINFV VLTAALSGCN SGMYSCGRML YALAKNRQLP AAMAKVSRHG VPVAGVAVSI AILLIGSCLN YIIPNPQRVF VYVYSASVLP GMVPWFVILI SQLRFRRAHK AAIASHPFRS ILFPWANYVT MAFLICVLIG MYFNEDTRMS LFVGIIFMLA VTAIYKVFGL NRHGKAHKLE E
|
| |