Gene EcDH1_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4179 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4530277 
End bp4531512 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRadical SAM domain protein 
Protein accessionACX41779 
Protein GI260451357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000042782 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAC AGGTTCCAAC GCGTGCTTTT CATGTGATGG CGAAACCGAG CGGTTCCGAT 
TGTAATCTGA ACTGTGACTA CTGTTTTTAT CTCGAAAAAC AATCCCTTTA CCGCGAAAAG
CCAGTCACGC ATATGGACGA TGACACGCTG GAAGCGTATG TCCGTCACTA TATCGCTGCC
AGCGAACCGC AAAACGAAGT GGCTTTTACC TGGCAGGGCG GCGAACCAAC GCTACTCGGG
CTGGCGTTTT ACCGCCGTGC CGTAGCGCTA CAGGCGAAAT ATGGTGCTGG CAGGAAGATA
AGTAACAGCT TCCAGACTAA CGGCGTGCTG CTGGATGACG AATGGTGCGC GTTTCTCGCG
GAGCATCATT TTCTTGTTGG TTTATCGCTG GATGGCCCGC CTGAGATCCA CAATCAATAT
CGCGTGACTA AAGGTGGCAG ACCCACGCAT AAGCTGGTGA TGCGTGCCCT GACGCTCCTG
CAAAAACATC ATGTCGACTA TAACGTGCTG GTCTGCGTTA ATCGCACCAG CGCGCAGCAA
CCGTTGCAGG TATATGATTT TTTGTGCGAT GCGGGAGTCG AATTCATCCA GTTTATTCCG
GTGGTCGAGC GCCTGGCTGA TGAAACAACT GCCCGCGATG GACTTAAGTT ACATGCGCCT
GGTGATATTC AGGGTGAGCT AACGGAATGG TCGGTGCGCC CCGAGGAGTT CGGTGAGTTT
CTGGTGGCGA TATTCGACCA CTGGATCAAA CGCGACGTCG GCAAGATTTT CGTGATGAAT
ATCGAATGGG CGTTTGCCAA TTTTGTCGGT GCGCCGGGTG CGGTTTGCCA TCATCAGCCA
ACCTGTGGGC GCTCGGTGAT TGTTGAGCAC AACGGCGACG TTTACGCCTG TGATCACTAT
GTTTATCCGC AATATCGGCT GGGGAATATG CACCAGCAAA CAATTGCAGA AATGATCGAT
TCCCCGCAAC AGCAGGCGTT TGGTGAAGAT AAATTTAAGC AGTTACCGGC GCAGTGTCGC
AGTTGTAACG TGTTAAAAGC GTGCTGGGGA GGCTGCCCGA AACACCGCTT CATGCTCGAT
GCCAGCGGCA AACCGGGACT GAATTATTTG TGTGCCGGGT ATCAGCGTTA TTTCCGCCAT
CTACCGCCAT ATCTTAAAGC AATGGCTGAT TTGCTGGCGC ACGGTCGCCC GGCCAGCGAC
ATTATGCATG CGCATTTGCT GGTGGTGAGT AAGTAG
 
Protein sequence
MLQQVPTRAF HVMAKPSGSD CNLNCDYCFY LEKQSLYREK PVTHMDDDTL EAYVRHYIAA 
SEPQNEVAFT WQGGEPTLLG LAFYRRAVAL QAKYGAGRKI SNSFQTNGVL LDDEWCAFLA
EHHFLVGLSL DGPPEIHNQY RVTKGGRPTH KLVMRALTLL QKHHVDYNVL VCVNRTSAQQ
PLQVYDFLCD AGVEFIQFIP VVERLADETT ARDGLKLHAP GDIQGELTEW SVRPEEFGEF
LVAIFDHWIK RDVGKIFVMN IEWAFANFVG APGAVCHHQP TCGRSVIVEH NGDVYACDHY
VYPQYRLGNM HQQTIAEMID SPQQQAFGED KFKQLPAQCR SCNVLKACWG GCPKHRFMLD
ASGKPGLNYL CAGYQRYFRH LPPYLKAMAD LLAHGRPASD IMHAHLLVVS K