Gene EcDH1_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4160 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4510292 
End bp4511182 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content51% 
IMG OID 
ProductRarD protein, DMT superfamily transporter 
Protein accessionACX41760 
Protein GI260451338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCAA AACAAACGCG GCAGGGCGTA TTACTCGCTC TTGCCGCTTA TTTTATTTGG 
GGTATAGCGC CAGCGTACTT CAAGTTGATT TACTACGTGC CCGCCGATGA AATCCTGACG
CATCGCGTGA TCTGGTCGTT TTTCTTTATG GTGGTGCTGA TGAGCATTTG CCGCCAGTGG
TCCTATTTAA AAACGCTGAT TCAGACGCCA CAGAAAATTT TTATGCTGGC AGTCTCTGCC
GTGCTGATTG GTGGCAACTG GCTACTGTTT ATCTGGGCGG TGAACAATCA CCATATGCTG
GAAGCGAGCC TTGGTTACTT TATTAACCCG CTGGTGAACA TTGTGCTGGG GATGATTTTC
CTCGGCGAGC GATTCCGCCG GATGCAATGG CTGGCGGTGA TTCTGGCGAT ATGTGGCGTG
TTAGTCCAGC TGTGGACTTT TGGTTCGCTA CCTATTATCG CGCTGGGACT GGCATTTAGT
TTTGCCTTCT ACGGTCTGGT ACGCAAGAAG ATTGCCGTTG AAGCGCAAAC CGGCATGTTA
ATCGAAACCA TGTGGCTGCT GCCCGTGGCG GCAATTTACC TGTTTGCTAT TGCCGACAGC
TCAACCAGCC ATATGGGGCA AAACCCGATG TCGCTGAATT TACTGCTGAT CGCCGCCGGT
ATTGTCACTA CCGTACCGCT GTTGTGTTTT ACCGCCGCTG CCACGCGCTT GCGTCTCTCA
ACGTTAGGCT TTTTCCAGTA CATTGGCCCG ACGCTGATGT TCCTGCTGGC TGTGACGTTT
TATGGTGAAA AACCGGGTGC CGATAAGATG GTGACTTTCG CCTTTATTTG GGTGGCGCTG
GCAATTTTTG TGATGGATGC GATTTATACG CAGCGTAGAA CGTCCAAATA A
 
Protein sequence
MDAKQTRQGV LLALAAYFIW GIAPAYFKLI YYVPADEILT HRVIWSFFFM VVLMSICRQW 
SYLKTLIQTP QKIFMLAVSA VLIGGNWLLF IWAVNNHHML EASLGYFINP LVNIVLGMIF
LGERFRRMQW LAVILAICGV LVQLWTFGSL PIIALGLAFS FAFYGLVRKK IAVEAQTGML
IETMWLLPVA AIYLFAIADS STSHMGQNPM SLNLLLIAAG IVTTVPLLCF TAAATRLRLS
TLGFFQYIGP TLMFLLAVTF YGEKPGADKM VTFAFIWVAL AIFVMDAIYT QRRTSK