Gene EcDH1_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4156 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4506093 
End bp4506713 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID 
Producthomoserine/threonine efflux pump 
Protein accessionACX41756 
Protein GI260451334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGT TATTTCTCAC CGTCGCCATG GTGCACATTG TGGCGCTTAT GAGCCCCGGT 
CCCGATTTCT TTTTTGTCTC TCAGACCGCT GTCAGTCGTT CCCGTAAAGA AGCGATGATG
GGCGTGCTGG GCATTACCTG CGGCGTAATG GTTTGGGCTG GGATTGCGCT GCTTGGCCTG
CATTTGATTA TCGAAAAAAT GGCCTGGCTG CATACGCTGA TTATGGTGGG CGGTGGCCTG
TATCTCTGCT GGATGGGTTA CCAGATGCTA CGTGGTGCAC TGAAAAAAGA GGCGGTTTCT
GCACCTGCGC CACAGGTCGA GCTGGCGAAA AGTGGGCGCA GTTTCCTGAA AGGTTTACTG
ACCAATCTCG CTAATCCGAA AGCGATTATC TACTTTGGCT CGGTGTTCTC ATTGTTTGTC
GGTGATAACG TTGGCACTAC CGCGCGCTGG GGCATTTTTG CGCTGATCAT TGTCGAAACG
CTGGCGTGGT TTACCGTCGT TGCCAGCCTG TTTGCCCTGC CGCAAATGCG CCGTGGTTAT
CAACGTCTGG CGAAGTGGAT TGATGGTTTT GCCGGGGCGT TATTTGCCGG ATTTGGCATT
CATTTGATTA TTTCGCGGTG A
 
Protein sequence
MLMLFLTVAM VHIVALMSPG PDFFFVSQTA VSRSRKEAMM GVLGITCGVM VWAGIALLGL 
HLIIEKMAWL HTLIMVGGGL YLCWMGYQML RGALKKEAVS APAPQVELAK SGRSFLKGLL
TNLANPKAII YFGSVFSLFV GDNVGTTARW GIFALIIVET LAWFTVVASL FALPQMRRGY
QRLAKWIDGF AGALFAGFGI HLIISR