Gene EcDH1_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4148 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4497278 
End bp4498039 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content54% 
IMG OID 
Producturidine phosphorylase 
Protein accessionACX41748 
Protein GI260451326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGT CTGATGTTTT TCATCTCGGC CTCACTAAAA ACGATTTACA AGGGGCTACG 
CTTGCCATCG TCCCTGGCGA CCCGGATCGT GTGGAAAAGA TCGCCGCGCT GATGGATAAG
CCGGTTAAGC TGGCATCTCA CCGCGAATTC ACTACCTGGC GTGCAGAGCT GGATGGTAAA
CCTGTTATCG TCTGCTCTAC CGGTATCGGC GGCCCGTCTA CCTCTATTGC TGTTGAAGAG
CTGGCACAGC TGGGCATTCG CACCTTCCTG CGTATCGGTA CAACGGGCGC TATTCAGCCG
CATATTAATG TGGGTGATGT CCTGGTTACC ACGGCGTCTG TCCGTCTGGA TGGCGCGAGC
CTGCACTTCG CACCGCTGGA ATTCCCGGCT GTCGCTGATT TCGAATGTAC GACTGCGCTG
GTTGAAGCTG CGAAATCCAT TGGCGCGACA ACTCACGTTG GCGTGACAGC TTCTTCTGAT
ACCTTCTACC CAGGTCAGGA ACGTTACGAT ACTTACTCTG GTCGCGTAGT TCGTCACTTT
AAAGGTTCTA TGGAAGAGTG GCAGGCGATG GGCGTAATGA ACTATGAAAT GGAATCTGCA
ACCCTGCTGA CCATGTGTGC AAGTCAGGGC CTGCGTGCCG GTATGGTAGC GGGTGTTATC
GTTAACCGCA CCCAGCAAGA GATCCCGAAT GCTGAGACGA TGAAACAAAC CGAAAGCCAT
GCGGTGAAAA TCGTGGTGGA AGCGGCGCGT CGTCTGCTGT AA
 
Protein sequence
MSKSDVFHLG LTKNDLQGAT LAIVPGDPDR VEKIAALMDK PVKLASHREF TTWRAELDGK 
PVIVCSTGIG GPSTSIAVEE LAQLGIRTFL RIGTTGAIQP HINVGDVLVT TASVRLDGAS
LHFAPLEFPA VADFECTTAL VEAAKSIGAT THVGVTASSD TFYPGQERYD TYSGRVVRHF
KGSMEEWQAM GVMNYEMESA TLLTMCASQG LRAGMVAGVI VNRTQQEIPN AETMKQTESH
AVKIVVEAAR RLL