Gene EcDH1_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4139 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4489649 
End bp4490137 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional acivator RfaH 
Protein accessionACX41739 
Protein GI260451317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCT GGTATTTACT GTACTGCAAG CGCGGGCAAC TTCAACGTGC CCAGGAACAC 
CTCGAAAGAC AGGCTGTGAA TTGCCTGGCA CCGATGATCA CCCTGGAAAA AATCGTGCGT
GGAAAACGTA CTGCAGTCAG TGAGCCATTG TTCCCCAACT ACCTGTTTGT GGAATTTGAC
CCAGAAGTGA TTCATACCAC GACTATCAAC GCGACCCGCG GTGTCAGCCA CTTCGTGCGC
TTTGGCGCGT CGCCAGCGAT AGTCCCATCG GCGGTTATTC ATCAGCTATC GGTATATAAA
CCGAAAGACA TTGTCGATCC GGCAACCCCT TATCCGGGTG ATAAGGTGAT TATTACCGAA
GGCGCGTTCG AAGGCTTTCA GGCCATTTTC ACCGAACCCG ATGGTGAGGC TCGCTCCATG
CTATTGCTTA ATCTTATTAA TAAAGAGATT AAGCACAGTG TGAAGAATAC CGAGTTCCGC
AAACTCTAA
 
Protein sequence
MQSWYLLYCK RGQLQRAQEH LERQAVNCLA PMITLEKIVR GKRTAVSEPL FPNYLFVEFD 
PEVIHTTTIN ATRGVSHFVR FGASPAIVPS AVIHQLSVYK PKDIVDPATP YPGDKVIITE
GAFEGFQAIF TEPDGEARSM LLLNLINKEI KHSVKNTEFR KL