Gene EcDH1_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4114 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4453313 
End bp4454023 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionACX41714 
Protein GI260451292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGA ATCAATCCAC CGTAGAAAAT GCAAAAGAGA AACTGGATCG GTGGTTGAAA 
GATGGCATCA CCACGCCGGG TGGAAAACTC CCTTCAGAAA GAGAGCTGGG AGAACTGCTG
GGCATTAAAC GTATGACGCT GCGCCAGGCG TTGTTGAACC TCGAGGCAGA ATCCAAAATC
TTCCGTAAGG ATCGTAAGGG GTGGTTCGTG ACCCAGCCGC GATTTAATTA CAGTCCGGAG
CTGTCGGCGA GCTTTCAGCG GGCCGCAATT GAGCAAGGGC GAGAGCCTTC CTGGGGGTTT
ACCGAGAAAA ACCGTACCAG CGATATTCCC GAGACGCTCG CGCCACTGAT TGCAGTGACG
CCATCAACTG AACTCTATCG CATCACCGGC TGGGGGGCGC TGGAAGGACA TAAAGTTTTC
TATCACGAAA CATATATTAA TCCTGAAGTT GCTCCGGGCT TTATTGAACA ACTTGAAAAC
CACTCATTTT CTGCAGTCTG GGAAAAGTGC TACCAAAAAG AGACGGTAGT AAAAAAATTG
ATTTTCAAAC CCGTCAGAAT GCCGGGCGAT ATCAGCAAGT ATCTTGGCGG TTCTGCGGGT
ATGCCAGCGA TCTTAATTGA AAAGCATCGC GCCGACCAGC AAGGCAATAT TGTCCAAATA
GATATTGAAT ATTGGCGATT TGAGGCCGTA GACCTCATCA TTAATCTGTA G
 
Protein sequence
MAENQSTVEN AKEKLDRWLK DGITTPGGKL PSERELGELL GIKRMTLRQA LLNLEAESKI 
FRKDRKGWFV TQPRFNYSPE LSASFQRAAI EQGREPSWGF TEKNRTSDIP ETLAPLIAVT
PSTELYRITG WGALEGHKVF YHETYINPEV APGFIEQLEN HSFSAVWEKC YQKETVVKKL
IFKPVRMPGD ISKYLGGSAG MPAILIEKHR ADQQGNIVQI DIEYWRFEAV DLIINL