Gene EcDH1_4111 details

Gene Information

• Locus tag: EcDH1_4111
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 4450175
• End bp: 4450867
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 41%
• Product: Oligogalacturonate-specific porin
• Protein accession: ACX41711
• Protein GI: 260451289

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TTAATGCAAT AATTTTATTA TCTTCTCTGA CCTCTGCCTC GGTATTTGCT 
GGCGCATACG TCGAAAACAG GGAGGCATAT AATCTTGCCT CCGATCAGGG CGAGGTTATG 
CTACGTGTGG GTTATAACTT CGATATGGGC GCGGGTATTA TGTTAACCAA TACCTACAAC 
TTTCAGCGAG AAGATGAACT AAAACATGGA TATAACGAAA TTGAAGGCTG GTATCCGTTA 
TTTAAACCAA CCGATAAATT AACCATCCAG CCCGGTGGCT TAATTAATGA TAAGAGTATC 
GGTTCGGGTG GTGCAGTGTA TCTGGACGTC AACTATAAAT TTGTACCATG GTTTAATCTG 
ACAGTACGAA ATCGCTATAA CCATAATAAC TATAGTTCAA CAGATTTGAG CGGGGAACTG 
GATAATAATG ACACCTATGA AATTGGCACC TACTGGAATT TTAAAATCAC CGATAAATTT 
TCCTATACAT TTGAGCCACA TTACTTCATG CGAGTGAATG ACTTTAATAG TAGCAACGGG 
AAAGATCATC ATTGGGAAAT CACTAACACC TTCCGTTACC GTATTAATGA ACACTGGCTC 
CCTTATTTCG AATTGCGCTG GTTAGACCGC AACGTCGAAC CGTACCACCG CGAGCAAAAC 
CAGATCCGTA TCGGGACGAA GTATTTCTTC TGA 

 

Protein sequence

MKKINAIILL SSLTSASVFA GAYVENREAY NLASDQGEVM LRVGYNFDMG AGIMLTNTYN 
FQREDELKHG YNEIEGWYPL FKPTDKLTIQ PGGLINDKSI GSGGAVYLDV NYKFVPWFNL 
TVRNRYNHNN YSSTDLSGEL DNNDTYEIGT YWNFKITDKF SYTFEPHYFM RVNDFNSSNG 
KDHHWEITNT FRYRINEHWL PYFELRWLDR NVEPYHREQN QIRIGTKYFF