Gene EcDH1_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4105 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4441819 
End bp4442697 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content54% 
IMG OID 
Productdeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionACX41705 
Protein GI260451283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT ACACCATCAA CGACATTACG CGCGCATCGG GCGGTTTTGC CATGCTGGCG 
GTCGATCAGC GCGAAGCCAT GCGCATGATG TTTGCCGCGG CTGGGGCACC CGCTCCGGTA
GCCGATAGCG TTTTAACTGA TTTCAAAGTT AACGCTGCAA AGGCCCTCTC GCCTTATGCC
TCGGCGATTC TGGTAGATCA ACAATTCTGC TACCGCCAGG TGGTTGAGCA AAACGCGATT
GCCAAAAGTT GCGCCATGAT TGTCGCCGCC GATGAGTTCA TTCCTGGCAA CGGTATTCCG
GTCGATAGCG TGGTTATTGA CCGCAAAATC AATCCGCTAC AGATCAAACA AGACGGTGGC
AAAGCCTTAA AACTGCTGGT GCTGTGGCGT AGTGATGAAG ATGCGCAGCA ACGTCTGGAT
ATGGTGAAAG AGTTCAACGA ACTGTGCCAC TCACACGGTC TGGTAAGCAT CATTGAGCCA
GTCGTCCGCC CACCGCGTCG TGGCGATAAA TTCGATCGCG AACAAGCGAT CATCGATGCC
GCCAAAGAGC TGGGCGACAG TGGCGCTGAC CTCTACAAAG TTGAAATGCC GCTTTATGGC
AAAGGTCCGC AACAAGAGCT TCTCTGTGCT TCACAACGTC TGAATGACCA TATCAATATG
CCATGGGTGA TCCTCTCTTC CGGTGTCGAC GAAAAACTGT TCCCGCGTGC CGTACGCGTG
GCAATGACGG CGGGCGCATC GGGATTCCTG GCAGGCCGTG CAGTCTGGGC ATCGGTCGTC
GGTTTACCAG ACAACGAGCT GATGCTGCGT GACGTTTGCG CACCGAAATT ACAACAACTT
GGCGATATCG TCGACGAAAT GATGGCTAAA CGCCGCTAA
 
Protein sequence
MNKYTINDIT RASGGFAMLA VDQREAMRMM FAAAGAPAPV ADSVLTDFKV NAAKALSPYA 
SAILVDQQFC YRQVVEQNAI AKSCAMIVAA DEFIPGNGIP VDSVVIDRKI NPLQIKQDGG
KALKLLVLWR SDEDAQQRLD MVKEFNELCH SHGLVSIIEP VVRPPRRGDK FDREQAIIDA
AKELGDSGAD LYKVEMPLYG KGPQQELLCA SQRLNDHINM PWVILSSGVD EKLFPRAVRV
AMTAGASGFL AGRAVWASVV GLPDNELMLR DVCAPKLQQL GDIVDEMMAK RR