Gene EcDH1_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4100 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4437452 
End bp4438324 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content51% 
IMG OID 
Productribonuclease BN 
Protein accessionACX41700 
Protein GI260451278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAA CCATTCAGGA CAAAGCCAGG CACCGTACCC GTCCACTATG GGCCTGGCTA 
AAACTACTCT GGCAACGCAT TGATGAGGAC AACATGACAA CCCTGGCAGG TAACCTTGCC
TATGTGTCGT TGCTCTCATT AGTGCCGCTG GTTGCCGTTG TTTTTGCGCT TTTCGCCGCT
TTTCCCATGT TTTCCGACGT CAGCATTCAG TTACGTCACT TTATTTTTGC CAACTTTCTG
CCTGCTACTG GCGATGTTAT TCAGCGGTAT ATCGAACAAT TTGTTGCCAA TTCCAACAAG
ATGACCGCCG TTGGGGCGTG CGGGCTGATC GTCACCGCGT TATTGTTGAT GTACTCCATC
GATAGCGCGT TGAATACCAT CTGGCGCAGT AAACGAGCGC GACCAAAAAT TTACTCGTTC
GCCGTGTACT GGATGATTTT AACGCTGGGG CCGCTGCTGG CAGGGGCCAG TCTGGCGATC
AGTTCCTATT TGCTCTCCCT GCGCTGGGCG AGCGATCTCA ATACTGTCAT CGACAACGTG
CTGCGTATTT TTCCGTTGCT GTTGTCGTGG ATCTCCTTCT GGTTGCTGTA CAGCATTGTT
CCTACCATCC GCGTACCTAA CCGCGACGCG ATTGTCGGCG CGTTTGTCGC CGCACTCCTG
TTCGAAGCAG GAAAGAAAGG TTTCGCGCTT TATATCACCA TGTTCCCGTC ATATCAGCTC
ATTTATGGTG TGCTGGCGGT GATCCCCATT CTCTTTGTTT GGGTCTACTG GACATGGTGT
ATCGTCTTGC TTGGCGCGGA AATTACTGTC ACTCTCGGGG AATACCGCAA ACTAAAACAA
GCAGCTGAAC AAGAAGAAGA CGACGAACCA TGA
 
Protein sequence
MLKTIQDKAR HRTRPLWAWL KLLWQRIDED NMTTLAGNLA YVSLLSLVPL VAVVFALFAA 
FPMFSDVSIQ LRHFIFANFL PATGDVIQRY IEQFVANSNK MTAVGACGLI VTALLLMYSI
DSALNTIWRS KRARPKIYSF AVYWMILTLG PLLAGASLAI SSYLLSLRWA SDLNTVIDNV
LRIFPLLLSW ISFWLLYSIV PTIRVPNRDA IVGAFVAALL FEAGKKGFAL YITMFPSYQL
IYGVLAVIPI LFVWVYWTWC IVLLGAEITV TLGEYRKLKQ AAEQEEDDEP