Gene EcDH1_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4082 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4420198 
End bp4421022 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID 
Productrhamnulose-1-phosphate aldolase 
Protein accessionACX41682 
Protein GI260451260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA TTACTCAGTC CTGGTTTGTC CAGGGAATGA TCAAAGCCAC CACCGACGCC 
TGGCTGAAAG GCTGGGATGA GCGCAACGGC GGCAACCTGA CGCTACGCCT GGATGACGCC
GATATCGCAC CATATCACGA CAATTTCCAC CAACAACCGC GCTATATCCC GCTCAGCCAG
CCCATGCCTT TACTGGCAAA TACACCGTTT ATTGTCACCG GCTCGGGCAA ATTCTTCCGT
AACGTCCAGC TTGATCCTGC GGCTAACTTA GGCATCGTAA AAGTCGACAG CGACGGCGCG
GGCTACCACA TTCTTTGGGG GTTAACCAAC GAAGCCGTCC CCACTTCCGA ACTTCCGGCT
CACTTCCTTT CCCACTGCGA GCGCATTAAA GCCACCAACG GCAAAGATCG GGTGATCATG
CACTGCCACG CCACCAACCT GATCGCCCTC ACCTATGTAC TTGAAAACGA CACCGCGGTC
TTCACTCGCC AACTGTGGGA AGGCAGCACC GAGTGTCTGG TGGTATTCCC GGATGGCGTT
GGCATTTTGC CGTGGATGGT GCCCGGCACG GACGAAATCG GCCAGGCGAC CGCACAAGAG
ATGCAAAAAC ATTCGCTGGT GTTGTGGCCC TTCCACGGCG TCTTCGGCAG CGGACCGACG
CTGGATGAAA CCTTCGGTTT AATCGACACC GCAGAAAAAT CAGCACAAGT ATTAGTGAAG
GTTTATTCGA TGGGCGGCAT GAAACAGACC ATCAGCCGTG AAGAGTTGAT AGCGCTCGGC
AAGCGTTTCG GCGTTACGCC ACTCGCCAGT GCGCTGGCGC TGTAA
 
Protein sequence
MQNITQSWFV QGMIKATTDA WLKGWDERNG GNLTLRLDDA DIAPYHDNFH QQPRYIPLSQ 
PMPLLANTPF IVTGSGKFFR NVQLDPAANL GIVKVDSDGA GYHILWGLTN EAVPTSELPA
HFLSHCERIK ATNGKDRVIM HCHATNLIAL TYVLENDTAV FTRQLWEGST ECLVVFPDGV
GILPWMVPGT DEIGQATAQE MQKHSLVLWP FHGVFGSGPT LDETFGLIDT AEKSAQVLVK
VYSMGGMKQT ISREELIALG KRFGVTPLAS ALAL