Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_4081 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 4418488 |
End bp | 4419747 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | L-rhamnose isomerase |
Protein accession | ACX41681 |
Protein GI | 260451259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTC AACTGGAACA GGCCTGGGAG CTAGCGAAAC AGCGTTTCGC GGCGGTGGGG ATTGATGTCG AGGAGGCGCT GCGCCAACTT GATCGTTTAC CCGTTTCAAT GCACTGCTGG CAGGGCGATG ATGTTTCCGG TTTTGAAAAC CCGGAAGGTT CGCTGACCGG GGGGATTCAG GCCACAGGCA ATTATCCGGG CAAAGCGCGT AATGCCAGTG AGCTACGTGC CGATCTGGAA CAGGCTATGC GGCTGATTCC GGGGCCGAAA CGGCTTAATT TACATGCCAT CTATCTGGAA TCAGATACGC CAGTCTCGCG CGACCAGATC AAACCAGAGC ACTTCAAAAA CTGGGTTGAA TGGGCGAAAG CCAATCAGCT CGGTCTGGAT TTTAACCCCT CCTGCTTTTC GCATCCGCTA AGCGCCGATG GCTTTACGCT TTCCCATGCC GACGACAGCA TTCGCCAGTT CTGGATTGAT CACTGCAAAG CCAGCCGTCG CGTTTCGGCC TATTTTGGCG AGCAACTCGG CACACCATCG GTGATGAACA TCTGGATCCC GGATGGTATG AAAGATATCA CCGTTGACCG TCTCGCCCCG CGTCAGCGTC TGCTGGCAGC ACTGGATGAG GTGATCAGCG AGAAGCTAAA CCCTGCGCAC CATATCGACG CCGTTGAGAG CAAATTGTTT GGCATTGGCG CAGAGAGCTA CACGGTTGGC TCCAATGAGT TTTACATGGG GTATGCCACC AGCCGCCAGA CTGCGCTGTG CCTGGACGCC GGGCACTTCC ACCCGACTGA AGTGATTTCC GACAAGATTT CCGCCGCCAT GCTGTATGTG CCGCAGTTGC TGCTGCACGT CAGCCGTCCG GTTCGCTGGG ACAGCGATCA CGTAGTGCTG CTGGATGATG AAACCCAGGC AATTGCCAGT GAGATTGTGC GTCACGATCT GTTTGACCGG GTGCATATCG GCCTTGACTT CTTCGATGCC TCTATCAACC GCATTGCCGC GTGGGTCATT GGTACACGCA ATATGAAAAA AGCCCTGCTG CGTGCGTTGC TGGAACCTAC CGCTGAGCTG CGCAAGCTGG AAGCGGCGGG CGATTACACT GCGCGTCTGG CACTGCTGGA AGAGCAGAAA TCGTTGCCGT GGCAGGCGGT CTGGGAAATG TATTGCCAAC GTCACGATAC GCCAGCAGGT AGCGAATGGC TGGAGAGCGT GCGGGCTTAT GAGAAAGAAA TTTTGAGTCG CCGCGGGTAA
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Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVSGFEN PEGSLTGGIQ ATGNYPGKAR NASELRADLE QAMRLIPGPK RLNLHAIYLE SDTPVSRDQI KPEHFKNWVE WAKANQLGLD FNPSCFSHPL SADGFTLSHA DDSIRQFWID HCKASRRVSA YFGEQLGTPS VMNIWIPDGM KDITVDRLAP RQRLLAALDE VISEKLNPAH HIDAVESKLF GIGAESYTVG SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PQLLLHVSRP VRWDSDHVVL LDDETQAIAS EIVRHDLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTAEL RKLEAAGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPAG SEWLESVRAY EKEILSRRG
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