Gene EcDH1_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4079 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4415898 
End bp4416734 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content52% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionACX41679 
Protein GI260451257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTAT TACATAGTGT GGATTTTTTT CCGTCTGGTA ACGCGTCCGT GGCGATAGAA 
CCCCGGCTCC CGCAGGCGGA TTTTCCTGAA CATCATCATG ATTTTCATGA AATTGTGATT
GTCGAACATG GCACGGGTAT TCATGTGTTT AATGGGCAGC CCTATACCAT CACCGGTGGC
ACGGTCTGTT TCGTACGCGA TCATGATCGG CATCTGTATG AACATACCGA TAATCTGTGT
CTGACCAATG TGCTGTATCG CTCGCCGGAT CGATTTCAGT TTCTCGCCGG GCTGAATCAG
TTGCTGCCAC AAGAGCTGGA TGGGCAGTAT CCGTCTCACT GGCGCGTTAA CCACAGCGTA
TTGCAGCAGG TGCGACAGCT GGTTGCACAG ATGGAACAGC AGGAAGGGGA AAATGATTTA
CCCTCGACCG CCAGTCGCGA GATCTTGTTT ATGCAATTAC TGCTCTTGCT GCGTAAAAGC
AGTTTGCAGG AGAACCTGGA AAACAGCGCA TCACGTCTCA ACTTGCTTCT GGCCTGGCTG
GAGGACCATT TTGCCGATGA GGTGAATTGG GATGCCGTGG CGGATCAATT TTCTCTTTCA
CTGCGTACGC TACATCGGCA GCTTAAGCAG CAAACGGGAC TGACGCCTCA GCGATACCTG
AACCGCCTGC GACTGATGAA AGCCCGACAT CTGCTACGCC ACAGCGAGGC CAGCGTTACT
GACATCGCCT ATCGCTGTGG ATTCAGCGAC AGTAACCACT TTTCGACGCT TTTTCGCCGA
GAGTTTAACT GGTCACCGCG TGATATTCGC CAGGGACGGG ATGGCTTTCT GCAATAA
 
Protein sequence
MTVLHSVDFF PSGNASVAIE PRLPQADFPE HHHDFHEIVI VEHGTGIHVF NGQPYTITGG 
TVCFVRDHDR HLYEHTDNLC LTNVLYRSPD RFQFLAGLNQ LLPQELDGQY PSHWRVNHSV
LQQVRQLVAQ MEQQEGENDL PSTASREILF MQLLLLLRKS SLQENLENSA SRLNLLLAWL
EDHFADEVNW DAVADQFSLS LRTLHRQLKQ QTGLTPQRYL NRLRLMKARH LLRHSEASVT
DIAYRCGFSD SNHFSTLFRR EFNWSPRDIR QGRDGFLQ