| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_4029 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4359623 |
|---|
| End bp | 4360774 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | acetylornithine deacetylase (ArgE) |
|---|
| Protein accession | ACX41629 |
|---|
| Protein GI | 260451207 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AATTACCGCC ATTTATCGAG ATTTACCGCG CTCTGATTGC CACACCTTCA
ATAAGCGCCA CGGAAGAGGC ACTCGATCAA AGCAATGCAG ATTTAATCAC TCTGCTGGCG
GACTGGTTTA AAGATTTGGG CTTCAATGTG GAAGTGCAGC CTGTTCCAGG AACTCGCAAC
AAATTCAATA TGCTGGCAAG TATCGGACAG GGGGCTGGCG GCTTGTTGCT GGCGGGGCAT
ACCGATACGG TGCCATTTGA TGACGGTCGC TGGACGCGCG ATCCGTTTAC ACTGACGGAG
CATGACGGCA AGCTTTACGG CTTAGGCACC GCCGACATGA AAGGCTTTTT TGCGTTTATC
CTTGATGCGC TACGCGATGT CGACGTCACG AAACTGAAAA AACCGCTCTA CATTCTGGCG
ACTGCTGATG AAGAAACCAG TATGGCCGGA GCGCGTTATT TTGCCGAAAC TACCGCCCTG
CGCCCGGATT GCGCCATCAT TGGCGAACCG ACGTCACTAC AACCGGTACG CGCACATAAA
GGTCATATCT CTAACGCCAT CCGTATTCAG GGCCAGTCGG GGCACTCCAG CGATCCAGCA
CGCGGAGTTA ACGCTATCGA ACTAATGCAC GACGCCATCG GGCATATTTT GCAATTGCGC
GATAACCTGA AAGAACGTTA TCACTACGAA GCGTTTACCG TGCCATACCC TACGCTCAAC
CTCGGGCATA TTCACGGTGG CGACGCTTCT AACCGTATTT GCGCTTGCTG TGAGTTGCAT
ATGGATATTC GTCCGCTGCC TGGCATGACA CTCAATGAAC TTAATGGTTT GCTCAACGAT
GCATTGGCTC CGGTGAGCGA ACGCTGGCCG GGTCGTCTGA CGGTCGACGA GCTGCATCCG
CCGATCCCTG GCTATGAATG CCCACCGAAT CATCAACTGG TTGAAGTGGT TGAGAAATTG
CTCGGAGCAA AAACCGAAGT GGTGAACTAC TGTACCGAAG CGCCGTTTAT TCAAACGTTA
TGCCCGACGC TGGTGTTGGG GCCTGGCTCA ATTAATCAGG CTCATCAACC TGATGAATAT
CTGGAAACAC GGTTTATCAA GCCCACCCGC GAACTGATAA CCCAGGTAAT TCACCATTTT
TGCTGGCATT AA
|
|---|
| Protein sequence | MKNKLPPFIE IYRALIATPS ISATEEALDQ SNADLITLLA DWFKDLGFNV EVQPVPGTRN
KFNMLASIGQ GAGGLLLAGH TDTVPFDDGR WTRDPFTLTE HDGKLYGLGT ADMKGFFAFI
LDALRDVDVT KLKKPLYILA TADEETSMAG ARYFAETTAL RPDCAIIGEP TSLQPVRAHK
GHISNAIRIQ GQSGHSSDPA RGVNAIELMH DAIGHILQLR DNLKERYHYE AFTVPYPTLN
LGHIHGGDAS NRICACCELH MDIRPLPGMT LNELNGLLND ALAPVSERWP GRLTVDELHP
PIPGYECPPN HQLVEVVEKL LGAKTEVVNY CTEAPFIQTL CPTLVLGPGS INQAHQPDEY
LETRFIKPTR ELITQVIHHF CWH
|
|---|
| |