Gene EcDH1_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3997 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4315690 
End bp4316754 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content56% 
IMG OID 
Producturoporphyrinogen decarboxylase 
Protein accessionACX41597 
Protein GI260451175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC TTAAAAACGA TCGTTATCTG CGGGCGCTGC TGCGCCAGCC CGTTGATGTC 
ACTCCAGTAT GGATGATGCG CCAGGCGGGT CGCTATCTAC CGGAATATAA AGCCACGCGC
GCCCAGGCAG GCGATTTTAT GTCGCTGTGC AAAAACGCCG AGCTGGCGTG CGAAGTGACT
TTGCAACCGC TGCGTCGCTA CCCGCTGGAT GCGGCGATCC TCTTTTCCGA TATCCTCACC
GTGCCGGACG CGATGGGGTT AGGGCTCTAT TTTGAAGCCG GAGAAGGTCC GCGTTTTACC
TCGCCAGTCA CCTGCAAAGC TGACGTCGAT AAACTGCCAA TTCCGGACCC GGAAGATGAA
CTGGGTTACG TGATGAACGC GGTGCGTACC ATTCGTCGCG AACTGAAAGG CGAAGTGCCG
CTGATTGGTT TTTCCGGCAG CCCGTGGACG CTGGCGACCT ACATGGTGGA AGGCGGCAGC
AGCAAAGCCT TCACCGTGAT CAAAAAAATG ATGTATGCCG ATCCGCAGGC GCTGCACGCT
CTGCTCGATA AACTGGCGAA AAGCGTCACT TTGTATCTGA ATGCGCAGAT TAAAGCCGGT
GCTCAGGCAG TGATGATTTT CGACACCTGG GGCGGCGTGC TTACCGGGCG CGATTATCAA
CAGTTCTCGC TCTATTACAT GCATAAAATT GTTGATGGTT TACTGCGTGA AAACGACGGT
CGCCGCGTAC CGGTCACGCT GTTTACCAAA GGCGGCGGAC AGTGGCTGGA AGCCATGGCA
GAAACCGGTT GCGATGCGCT GGGCCTCGAC TGGACAACGG ACATCGCCGA TGCGCGCCGC
CGTGTGGGCA ATAAAGTCGC GTTGCAGGGT AATATGGATC CGTCGATGCT GTACGCGCCG
CCTGCCCGCA TTGAAGAAGA AGTAGCGACT ATACTTGCAG GTTTCGGTCA CGGCGAAGGT
CATGTCTTTA ACCTTGGTCA CGGCATTCAT CAGGATGTGC CGCCAGAACA TGCTGGCGTG
TTCGTGGAGG CAGTGCATCG ACTGTCTGAA CAGTATCACC GCTAA
 
Protein sequence
MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT 
LQPLRRYPLD AAILFSDILT VPDAMGLGLY FEAGEGPRFT SPVTCKADVD KLPIPDPEDE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHA
LLDKLAKSVT LYLNAQIKAG AQAVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGNKVALQG NMDPSMLYAP
PARIEEEVAT ILAGFGHGEG HVFNLGHGIH QDVPPEHAGV FVEAVHRLSE QYHR