Gene EcDH1_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3979 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4290842 
End bp4291666 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionACX41579 
Protein GI260451157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCAC CCATTCCCGC GAAACGCGGC AGAAAACCCG CCGTTGCCAC CGCACCAGCG 
ACTGGACAGG TTCAGTCTTT AACGCGTGGC CTGAAATTAC TGGAGTGGAT TGCCGAATCC
AATGGCAGTG TGGCACTCAC GGAACTGGCG CAACAAGCCG GGTTACCCAA TTCCACGACC
CACCGCCTGC TAACCACGAT GCAACAGCAG GGTTTCGTGC GTCAGGTTGG CGAACTGGGA
CATTGGGCAA TCGGCGCACA TGCCTTTATG GTCGGCAGCA GCTTTCTCCA GAGCCGTAAT
TTGTTAGCGA TTGTTCACCC TATCCTGCGC AATCTAATGG AAGAGTCTGG CGAAACGGTC
AATATGGCGG TGCTTGATCA AAGCGATCAC GAAGCGATTA TTATCGACCA GGTACAGTGT
ACGCATCTGA TGCGAATGTC CGCGCCTATC GGCGGTAAAT TGCCGATGCA CGCTTCCGGT
GCGGGTAAAG CCTTTTTAGC CCAACTGAGC GAAGAACAGG TGACGAAGCT GCTGCACCGC
AAAGGGTTAC ATGCCTATAC CCACGCAACG CTGGTGTCTC CTGTGCATTT AAAAGAAGAT
CTCGCCCAAA CGCGCAAACG GGGTTATTCA TTTGACGATG AGGAACATGC ACTGGGGCTA
CGTTGCCTTG CAGCGTGTAT TTTCGATGAG CACCGTGAAC CGTTTGCCGC AATTTCTATT
TCCGGACCGA TTTCACGTAT TACCGATGAC CGCGTGACCG AGTTTGGCGC GATGGTGATT
AAAGCGGCGA AGGAAGTGAC GCTGGCGTAC GGTGGAATGC GCTGA
 
Protein sequence
MVAPIPAKRG RKPAVATAPA TGQVQSLTRG LKLLEWIAES NGSVALTELA QQAGLPNSTT 
HRLLTTMQQQ GFVRQVGELG HWAIGAHAFM VGSSFLQSRN LLAIVHPILR NLMEESGETV
NMAVLDQSDH EAIIIDQVQC THLMRMSAPI GGKLPMHASG AGKAFLAQLS EEQVTKLLHR
KGLHAYTHAT LVSPVHLKED LAQTRKRGYS FDDEEHALGL RCLAACIFDE HREPFAAISI
SGPISRITDD RVTEFGAMVI KAAKEVTLAY GGMR